Mesorhizobium amorphae: A6B35_19880
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Entry
A6B35_19880 CDS
T04446
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6B35_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamo03021
]
A6B35_19880
03400 DNA repair and recombination proteins [BR:
mamo03400
]
A6B35_19880
Enzymes [BR:
mamo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6B35_19880
Transcription machinery [BR:
mamo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6B35_19880
DNA repair and recombination proteins [BR:
mamo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6B35_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RnfC_N
Phage_cement_4
Motif
Other DBs
NCBI-ProteinID:
ANT51994
UniProt:
G6Y9J7
LinkDB
All DBs
Position
complement(4222734..4226930)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFSHACRAGISFGKDDMLIPDAKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTA
LDDINHPVSGEVLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PILTEIEGKVQFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIVVHDTKGK
VGKLSKGGDARFLLSVEAILSVEPGAHVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTVRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEVAEPMLTDMVTAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatccccaggcgccggcgcaggtgttcgattcc
atccggatttcgctcgccagccctgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgcgacggcctgttctgcgcg
cgcatcttcggcccgatcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgc
gagcgcatgggccatatcgagctcgccgctccggtcgctcatatctggttcctgaagtcg
ctgccgtcgcgcatcggcacgctgctcgacatgaccctgaaggacatcgagcgcgtcctc
tacttcgagaactacatcgtcaccgagccaggcctcaccgcgctgaaggagcaccaactg
ctcagcgaggaagagtacatgatcgccgtcgacgagtatggcgaggattcattcaccgcc
atgatcggcgccgaggccattcatgacctgctcgccggcatggacctggagaagatcgcc
ggcgacctgcgttcggagctggcctcgaccacttccgagctgaagcagaagaagtatctg
aagcggctcaaggtcgtcgagaacttcatggagtccggcaaccgtccggaatggatgatc
atgaaggtggttccggtgatcccgccggacctgcgcccgctcgtcccgctggacggcggc
cgtttcgccacgtccgatttgaacgacctctatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgcccggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgacgcgctgttcgacaacggccgccgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattcgggccgctcggtcatcgtgaccggt
ccggagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactcttcaag
cccttcatctacgcccgcctcgacgccaagggtttctcctcgaccgtcaagcaggccaag
aagctggtcgagaaggagcgtccggaagtctgggatatcctcgacgaggtcatccgcgag
catccggtgctgttgaaccgcgcgccgacgctgcaccgcctcggcatccaggcgttcgag
ccgatcctgattgaaggcaaggcgatccagctgcatccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcctccggcgcgccg
atcatcgtgccgtcgcaggacatggttctcggtctctactatctctcgatcgtcaaccag
aacgagccgggcgagggcatggtgtttgccgatatgggcgaactccagcatgcgctcgag
accaaggcggtgacgctgcacgccaagatcaagggtcgcttccgcacggtcgacgccgaa
ggcaaggtcgtgtcgaagatccacgacaccacgcctggccgcatgatcatcggcgagctg
ctgccgaagaacgtcaacgtgccttacgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgaccgcatcatggccctcggcttcagccacgcctgccgcgccggcatttcgttcggc
aaggacgacatgctgatcccggacgccaagatcaagctggtgtccgacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggcctgatcacgcagggcgagaagtacaac
aaggtcgtcgacgcctgggccaagtgctcggaaaaggtcgccgacgagatgatggcccgc
atcaaggcggtcgagtttgaggacaatggccgtcagaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacccagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaaggcctgaccgtgctcgagtatttcaactcgacccacggcgcccgcaagggtctggcc
gacaccgccctgaagacggcgaactcgggctatctcacccgtcgtctggtcgacgtggcg
caggactgcatcgtcaattcggtcgactgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggccaggtcgtcgcttccgtcggccagcgcgtgctgggccgtacggcg
ctcgacgacatcaaccatccggtgtcgggcgaggttctggtcaaggccggaacgctgatg
gacgagcgtgacgtggaacagatcgaaaaggccggcgtgcagtcggtccgcatccgttcg
gcactgacctgcgaggtcagggtcggcgtctgcgcggtctgctacggacgcgatcttgcc
cgcggcaccccggtcaaccagggcgaagccgtcggcgtcattgcggcgcagtcgatcggc
gagccgggcacccagctcaccatgcgtaccttccacatgggcggtaccgcgcaggtggtg
gatagctcgttccttgaagcctcgtatgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaagccggcaaggaacgcgccacgcaccgggtcacctacggttcgcgcatcttcgtg
gacgatggcgacaaggtgaagcgtggccagcgtatcgccgagtgggatccttatacccgc
ccgatcctcaccgaaatcgagggcaaggtgcagttcgaggatctggtcgacggcatttcc
gtccaggaaacggctgacgaatcgaccggcatcaccaagcgcgaggttatcgactggcgt
tcgacgccacgcggcaacgacctcaagccggcgatcgtcgtgcatgacaccaagggcaag
gtcggcaagctgtcgaagggcggcgatgcccgcttcctgctctcggtcgaggcgatcctt
tcggtcgagccgggcgcgcatgtccggcccggcgacgtgctggcacgtatcccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaggca
cgccgtccgaaggaccacgccatcatcgccgagatcgacggcacggtccgcttcggccgc
gactacaagaacaagcgccgcatcatcatcgagccgcatgactcgacgcttgagccggtc
gaatacctgattccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaatccggcgccgcatgacatcctggccatcaagggcgtg
gaggcgcttgcgtcctacctcgtcaacgaaatccaggaggtctatcgcctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accacgcagggcgactcgacctacattccgggcgaccacgtcgacgtgatcgagctggaa
gaggtcaacgagcggctgatcgaggacggcaagaagccggccgaaggccagccagtgctg
ctcggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgacgagggttctcaccgaagcggcggttgccggcaagaccgacatgctgcagggc
ctaaaggaaaacgtcatcgtcggccgtctgatcccggccggcaccggcggcacgatgagc
cagatccggcgcatcgccacctcgcgcgacgagctgatcatcgacgagcgccgcaaggcc
tcgggtgtcgaggtcgccgagccgatgctgaccgacatggtcaccgccgcgcagtaa
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integrated database retrieval system
