Mesorhizobium amorphae: A6B35_20695
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Entry
A6B35_20695 CDS
T04446
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03030
DNA replication
mamo03430
Mismatch repair
mamo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6B35_20695
03430 Mismatch repair
A6B35_20695
03440 Homologous recombination
A6B35_20695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamo03032
]
A6B35_20695
03400 DNA repair and recombination proteins [BR:
mamo03400
]
A6B35_20695
Enzymes [BR:
mamo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6B35_20695
DNA replication proteins [BR:
mamo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6B35_20695
DNA repair and recombination proteins [BR:
mamo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6B35_20695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ANT52135
UniProt:
G6Y8H8
LinkDB
All DBs
Position
complement(4385428..4388955)
Genome browser
AA seq
1175 aa
AA seq
DB search
MADEKLPRDPLKREAAIAAARPEAPARPFIHLRVHSAYSLLEGALQIGKIVGHAVKDECP
AIAVTDTNNLFGALEFAQKAVKDGIQPIIGCQIDLAFSGENSDGQRDRRRQGPEMRAVVL
IAATEAGYANLVRLVSRVYLHTPPGEPVHLTSDMLQGQCDGLICLTGGPRGPIGNALKED
RRDLAEVRLLTLKALFGDRLYVELDRVSGYDRTIEKSTVDLAYSHDLPLVATNEAFFSAR
DDYEAHDALIAIAEGSVVAADNRRRLSPDNFLRSQADMARLFSDLPEAIDNTVEIALRCS
YYPKNRNPILPRFTGGDGADNETALKAEADELRRQAHEGLDARLAAHGPTAGYTDEQYRE
RLDFELGIIEKMKFPGYFLIVADFIKWAKSQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDTAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIEIDLARIPLDDPDTYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVGKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIQVLA
PSVMSSFRDFEVGENRIFYSLAALKGVGDAAVEHIVAMRGEKPFKNLADFCERVDPKIVG
KRVFESLITAGALDCFGHDRAAMMAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPATEPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWGEFSAAVKRGAAAGR
LAGTVTTKQERKTRTGNKMGVVQFSDTSGQYEAVLFSEGLAQYRDLLEPGRSVVITVSAE
DRPEGVNLRINSVQSLEDEASRIQKALRVFVRDDGPASIIQSQLKQRGDSQVSIIVLKGE
AQGEVEIALPGGYRVSPQIASAMRAVQGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaaaacttccacgcgatcccctgaagcgcgaagccgcgattgcagccgcg
cgtccggaggcgccggcgcggcccttcatccatctgcgcgtgcactcggcttattcgctg
cttgaaggcgccttgcagatcggcaagatcgtcggccacgcggtcaaggacgaatgtccg
gcgatcgccgtcaccgacaccaacaatttgttcggggcgctggagttcgcgcaaaaggcg
gtcaaggacggcatccaaccgatcatcggttgccagatcgatcttgccttttccggtgag
aacagcgacggccagcgcgaccgccggcggcagggaccggagatgcgcgccgtggtgctg
attgccgcgaccgaggccggctatgctaatctggtccggctcgtcagccgggtttatctc
cacacgccgcccggcgagcctgtgcacctgacgagcgacatgctgcaggggcaatgcgat
ggcctgatctgcctgaccggcgggccacgcggtccgatcggcaatgctttgaaggaagat
cgccgcgatctcgccgaggtacggctgctgaccctcaaagcgctgttcggcgaccggctc
tatgtcgagctggatcgggtttccggctatgaccggacaatcgagaagtcgacggtcgat
cttgcctacagccacgacctgccgctggtcgccaccaatgaggcgttcttctccgcccgc
gacgactacgaggcgcatgacgcgctgatcgccattgccgagggctccgtggtcgcggcc
gacaaccgccgccggctgtcgcctgacaatttcctgcgcagccaggccgatatggccagg
ttgttttcggacctgccggaagcgatcgacaacaccgtcgagatcgcgttgcgctgctcc
tactacccgaagaaccgcaacccgatcctgccgcgctttaccggtggcgatggcgccgac
aatgaaacggcgctgaaagcagaagccgacgaactgcgccgccaggcccatgaagggctc
gatgcgcggctggccgcgcatggacccaccgccggctatactgacgaacaatatcgcgaa
cggctggatttcgaactcggcatcatcgagaagatgaagttccccggctatttcctgatc
gtcgccgacttcatcaaatgggcgaagtcgcaaggcattccggtcgggccgggccgcggt
tcgggtgcaggctcgctggtagcctattcgacgaccatcaccgacatcgacccgctgcgc
ttctcgctgcttttcgagcgcttcctcaacccggatcgcgtctcgatgcccgacttcgac
atcgacttctgccaggaccggcgcgaggaggtgatacgctacgtccagcagaaatatggc
cgcgaccaggtcggccagatcatcaccttcggtacgctgcaggcgcgcgccgtgctgcgc
gacgtcggccgcgtgctgcagatgccttacggccaggtcgacaagctttccaagatggtg
ccgcagaacccggccaatccggtcaagctcgccgatgccatcgccaacgagccgcgcttt
gccgaggaggcggagaaggagccgatcgtccagacgctgctcgacaccgcacagaagctg
gaagggctctaccgccacgcctcgacgcatgccgccggcatcgtcatcggcgatagaccc
ttgtctgaactggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaagacg
ctgacggtgctggagacggcggtcaagctgatccgccgccgcggcatcgagatcgatctc
gcccgcattccgctcgacgatcccgacacctatgccatgctgtcgcgcggcgaagtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgatcggcatgcgacccgac
tgcatcgaggacatcatcgcgctggtcgcgctctaccgtccgggcccgatggagaacatc
ccgacctacaatgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggaacaggtcatgcagatc
gcgcaggaactgtccggctattcgctcggcgaagccgaccttttgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcggttcgtctcgggcgccgtagag
cgcggcgtcggcaagccgcaggccgacttcattttcgacctgctggcaaagttcgccgac
tatggtttcaacaagtcgcacgccgcggcctatgccgtggtgtcctatcagactgcctat
ctgaaagcgcattacccggtcgagttcctggcagcgtcgatgacgctcgacatgggcaac
accgacaagctcgcggatttccgccaggatgcgctgcgcctcggcatccaggtgctggcg
ccgtcggtgatgagcagtttccgcgacttcgaggtcggcgagaacaggatcttctattcg
ctggcggcactgaaaggtgtcggcgatgcggcggtcgagcacatcgtcgccatgcgcggc
gaaaagccgttcaagaaccttgccgatttctgcgaacgggtcgatccgaagatcgtcggc
aagcgcgttttcgaaagcctgatcaccgccggcgcgctcgattgcttcggccacgaccgt
gccgcgatgatggccggcgtagagcggatgatggggctggcgtcgctggcgcagcagaat
gcggtttccggccaggccgacattttcggcgcttcgctcggcgcgcagtcgcaggcactc
aacctgccggcgaccgagccatggctggccgccgaccggctgcaccgcgaattccaggtt
gtcggtttctatctctcggcccatccgctcgatgaatacaaggcggcgctgcagaagatg
cgggtgcagaactggggcgagttctcggccgccgtcaaacgcggtgccgctgccggccgg
ctcgccggcaccgtcaccaccaagcaggagcgcaagacgcgcaccggcaacaagatgggc
gtcgtgcagttttccgacacgtccggccagtacgaggcggtgttgttctccgaagggctg
gcgcagtatcgcgacctcctggagcccggccgttcggtggtgatcaccgtttcggccgaa
gacaggccggaaggcgtcaacctgcgcatcaactcggtgcaatcgctggaagatgaggcc
agccgcatccagaaggcgctgcgcgtctttgtccgggacgacgggccagcgtcgatcatt
caatcgcagctcaaacagcgtggcgacagccaggtcagcatcattgtcctcaagggagag
gcgcagggcgaggttgagatcgctctgccgggcggctatcgcgtctcgccacaaatcgcc
tcggccatgcgcgcggtgcagggcgtggtggaagtggagttggtgtga
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