Mesorhizobium amorphae: A6B35_22165
Help
Entry
A6B35_22165 CDS
T04446
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6B35_22165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamo03019
]
A6B35_22165
Messenger RNA biogenesis [BR:
mamo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6B35_22165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANT52398
UniProt:
G6YCF2
LinkDB
All DBs
Position
complement(4694658..4696328)
Genome browser
AA seq
556 aa
AA seq
DB search
MAKAENAELVFVPLGGVGEIGMNFALYGYGPANAREWIVVDVGVTFPDAAHPGVDLILPD
TRFIEENLDSLRGIVITHAHEDHYGALLDLWPKLKAPVWMTPFSAGLLEAKRQGEQGAPK
IPLTIYRAGETFSVGPFEIEAIPVAHSIPEPMSLAITTLAGTVIHTGDWKIDPEPTIGPK
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQGAKGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDYGFIPRENLVII
CTGSQGEPLAALAKLSRDEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGMKII
EDGDALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSMSGIGQVAQVRD
GDMLRLSPGAATIVDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADASGETLEDLMLDAAVGAVDSIPRQRRKDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcggaaaacgccgaactcgtcttcgtgccgcttggcggcgtcggcgagatc
ggcatgaacttcgccctctacggctacgggccggccaatgcgcgcgagtggatcgtcgtc
gatgtcggcgtcaccttcccggatgccgcgcatccgggcgtcgacctgatcctgcccgac
acgcgtttcatcgaggagaatctcgacagcctgcgcggcatcgtcatcacccatgcgcat
gaagaccactacggcgcgcttctcgacctgtggccgaagctgaaggcgccggtgtggatg
acgccgttcagcgccggcctgctggaagcaaagcggcaaggcgagcagggcgcgccgaag
attccgctgacgatctaccgggcgggcgagacattcagcgtcggtccgttcgagatcgag
gccattcccgtcgctcactccattcccgaaccgatgtcgctggcgatcaccacgctggcc
ggcaccgtcatccacaccggtgactggaagatcgatccggagccgacgatcgggccgaag
accgacgaggcgcgctttcgcgcctacggcgacaagggcgtgctggcgctgatctgcgat
tccaccaatgcgctgcgggaaggcgaatcgccgtcggaagtggccgtgggcgagggcctc
aagggcgtcatccagggcgccaagggccgcgtcgccgtcaccaccttctcctccaatgtc
gggcgcatcgtctccatcgccaaggcggcgcgcgatgccggccgccagtgcctggtgctc
ggccgctcgctgaagcgcgttatcgatgtcgccggcgagctcggctacatggacgggctg
ccggaattcatcgccgaggaggattacggcttcatcccgcgcgagaacctggtcatcatc
tgcaccggcagccagggcgagccgctggccgcactcgccaagctgtcgcgcgacgagatg
aagtcggtgtcgctgacggcaggcgacacggtggtgttttcctcgcgcaccattcccggc
aacgagaaggcgatcctcgagatcaagaaccgcctcatcgatctcggcatgaagatcatc
gaggatggcgacgcgctggtgcatgtctccgggcatccgcgccgcagcgagttgcgcaag
atgtatgaatgggtgcggccgcagatcggcgtgccggtgcatggcgaagcggcgcatctg
gtggcgcagggatcgctgatgtcgatgtccggcatcggccaggtggcgcaggtgcgcgac
ggcgatatgctcaggctctctcccggtgccgccacgatcgtcgaccaggtgccgttcggc
cgcatctacaaggacggccgcctgatcggcactgaccaggcgatgggcattcgcgaccgg
cgcaagctgtcctttgccggccatgtcgcggtcaatgtcgtgctcgacgataagtatgaa
ctggccggcgaccccgacctggtcgccatcggcgtcgccgaggccgacgccagcggcgag
acgctggaagacctgatgctcgatgcggcagtcggcgcggtggactccatcccccgccag
cgccgaaaagacctcgacctcgtgcaggaggcggtgcgccgcgccgtgcgcggtgccgcc
aacgaagcgtggggcaagaagccgttggtgacggtgttcgtcacaaggtga
DBGET
integrated database retrieval system
