Mesorhizobium amorphae: A6B35_26245
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Entry
A6B35_26245 CDS
T04446
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6B35_26245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamo03400
]
A6B35_26245
DNA repair and recombination proteins [BR:
mamo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6B35_26245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6B35_26245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
Microtub_bd
SWI2_SNF2
DUF2963
DUF87
Motif
Other DBs
NCBI-ProteinID:
ANT53122
UniProt:
G6YAL6
LinkDB
All DBs
Position
5607372..5610428
Genome browser
AA seq
1018 aa
AA seq
DB search
MAKLPDKKTPSAAQDDRGAPKRRSPLTDFLDASEPLHKGGFAEAPQTEFSGTPLTGSIAD
WAEQIEREAEQQPKPKAAKKIPERSASPGRTARGTSMGGAATARERTAAGLNPVAGLDIS
LEEAETMTSSGVTATVAALSALIESGNPLHKDGVLWTPHRPARPEKSEGGITIKMVSDFE
PAGDQPTAIKDLVEGVDGNDRTQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQ
LYSEFKKFFPENAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQIDRMRHSATRSLLE
RDDVIIVASVSCIYGIGSVETYTAMTFQMQIGDRLDQRALLADLVAQQYKRQDVNFVRGS
FRVRGDTIEIFPAHLEDRAWRISMFGDEIESITEFDPLTGQKTGELKSVKIYANSHYVTP
RPTLNQAIKSIKEELKLRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRY
LTGRQPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPLSVAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRPAKTQV
DDVVGEIRDTTRAGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEILRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADQVTGSMERAMAETNRRREKQMEWNAANGITPESVKSRISDILDSVYEKDHVRADISQ
FTDSAGAMMGNNLKAHLEALDKQMRDAAANLDFEKAARIRDEIKRLREMELAISDDPLAR
EVEGQSPASGREKGKHNKGVAKHRTAEEQERFRKLDEVRAAEEAAKAARHNLFRKPALDD
MGADGAVPVKKPLFAKPSIDDMGPGTDMPTPAGAVSRSLFKKQSAAEAHGSDFGIPGEAT
KPLFKKNSLDEMTVRRTETPIEGEKPVKRERAGIGSYEDPVDARREKRRPGKTGRPGR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacttcccgacaagaaaacgccctcggcggcgcaagacgaccgtggcgcgccg
aagcggcgcagcccgttgaccgatttcctcgatgcctcggagccgctccacaagggcggc
tttgccgaggcgccgcagaccgaattctccggtacgccgctgaccggctcgatcgccgac
tgggccgaacagatcgagcgcgaggccgagcagcagccgaagccgaaagctgcaaagaaa
atcccggagcgctccgcctctcctggccggacggcgcgtggcacctcgatgggtggcgcg
gcgacggccagggagcgcaccgcggccggtctcaacccggttgccgggctcgacatctcg
ctggaagaagccgagacgatgacctccagcggcgtcaccgccacggtggccgcgctctcc
gcgctcattgaatccggcaatcccctccacaaggacggcgtgctgtggacgccgcaccgc
cctgcccgcccggaaaaatccgaaggcggcatcaccatcaagatggtgtcggatttcgag
ccggcaggcgatcagccgacggcgatcaaggatctcgtcgagggcgtcgacggcaacgac
cgcacccaggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgaggagacgcaacgccccgccttgatcctggcgcccaacaagacgctggccgcgcag
ctctattccgagttcaagaaattcttcccggaaaacgccgtcgagtatttcgtctcctac
tacgactattaccagccggaagcctacgtgccgcgcaccgacaccttcatcgagaaggaa
tcctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgctcgcttctcgag
cgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggtatcggttcggtcgag
acctacacggcgatgaccttccagatgcagatcggcgaccggctcgaccagcgcgctctg
ctcgccgatctcgtcgcccagcaatacaagcgccaggacgtcaatttcgtccgcggctcg
ttccgcgtgcgcggcgacacgatcgagatctttccggcccacttggaagaccgcgcctgg
cgcatctcgatgttcggcgacgagatcgagtcgatcaccgagttcgacccgctgaccggc
cagaagaccggcgagctgaagagcgtcaagatctacgccaactcgcactacgtgacgccg
cgcccgaccttgaatcaagccatcaagtcgatcaaggaagaactcaagctccggctgcaa
gagcttgaaaaggctggccgcctgctggaagcacagcggctggaacagcgcacgcgcttc
gatctggagatgctggaagcgaccggctcctgcgccggcatcgagaattattcgcgctat
ctgaccggccgccagccaggcgatccgccgccgaccctgttcgaatacattcccgacaat
gcgctggtcttcatcgacgaaagccacgtcaccgtgccgcagatcggcggcatgtatcgc
ggcgactttcgccgcaaggcgacgctggccgaatatggtttccgtctgccgtcctgcatg
gacaaccggccgctgcgcttcgaggaatgggacgccatgcgtccgctttccgtcgccgtc
tcggcaacgccgggcggctgggaaatggaacagtccggcggcgtgttcgccgagcaggtc
atccgtcccaccggcttgatcgacccgccggtcgaggtgcgtcccgccaagacccaggtc
gacgatgtcgtcggcgagatccgcgacacgaccagggccggctaccgcacgctggtcacc
gtgctgaccaagcgcatggcggaggacctgaccgagtacctgcacgaacagggcatccgc
gtccgctacatgcactccgacatcgacacgctggagcgcatcgagatcctgcgcgaccta
cgcctcggcgccttcgacgtgctggtcggcatcaaccttttgcgcgaaggcctcgacatt
cccgaatgcggtttcgtcgccatcctcgacgccgacaaggaaggttttctgcgttcggaa
acctcgctgatccagaccatcggccgcgccgccagaaacgtcgacggcaaggtcatcctc
tatgccgaccaggtcaccggctcgatggagcgggcaatggccgagaccaaccgccgccgc
gaaaagcagatggagtggaacgccgccaacggcatcacgccggaatcggtcaagtcgcgc
atctccgacatcctggactcggtctacgagaaggaccatgtccgcgccgacatttcgcaa
ttcaccgacagcgccggcgccatgatgggcaacaatctcaaggcgcatctcgaggcgctc
gacaagcagatgcgcgacgccgccgccaatctcgacttcgagaaggccgcccgcatccgc
gacgagatcaagcggctgcgcgagatggaacttgcgatctccgacgacccgctggcgcgc
gaggtggaaggccaaagtcctgcctcaggccgcgagaagggcaagcacaacaagggtgtg
gccaaacatcgtacggccgaggaacaggagcgtttccgcaagctcgatgaggtacgtgcg
gccgaagaggcggccaaggctgcccggcacaaccttttccgcaagccggcgctagacgac
atgggcgccgatggcgccgtaccggtgaagaagccgctgtttgccaaaccgtcgattgac
gacatgggcccgggcaccgacatgccgacgccggcgggcgccgtctcgcgctcactgttc
aagaagcagtcggcggccgaggcgcacggctccgacttcggcattccgggcgaggccacc
aagccgctgttcaagaagaactcgctcgacgaaatgacggtgcggcgtaccgaaacgccg
atcgaaggcgaaaagccggtcaagcgcgaacgcgccggtatcggctcctacgaggacccg
gtagatgcccgccgcgagaaacgccggcccggcaagactggcagacccggtcggtag
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