Mycoplasma amphoriforme: MAMA39_02110
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Entry
MAMA39_02110 CDS
T06380
Name
(GenBank) unnamed protein product
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mamp
Mycoplasma amphoriforme
Pathway
mamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAMA39_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamp03019
]
MAMA39_02110
Messenger RNA biogenesis [BR:
mamp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MAMA39_02110
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
I-HmuI_NUMOD-like
Lactamase_B_6
Sulf_coat_C
Motif
Other DBs
NCBI-ProteinID:
CDN40334
UniProt:
A0A292IHB3
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All DBs
Position
complement(284098..285807)
Genome browser
AA seq
569 aa
AA seq
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MIHELVKPIPNKEPTKIFALGGLEEIGKNMYGIEYKDDLIIIDCGIKFADNELLGIDGII
ANFTYLHENAHKIKAVFITHGHEDHIGGIPYLLKEFNIPVIYAPKMASEFILRKLQEHKD
AKPTKIEVYTDDTVVKTKHFKIDFYRVNHSIPDSFGICVQTPNGNIVESGDFRFDFQAKG
EEFNLQKVAEIASRKVALFLSETTNAEIPGFSSSEENIYANINKIIKEAIGRVILTTFAS
NTTRINKVIEIALSLGRKICLLGKSMEANVAISRKVGYINMSDTDLVSSRDIKKYPDENI
MILCTGSQGEELAALNMMARGKHPWVSLKPTDTLIMSSNPIPGNYADVEYLINDLSKYGV
NVFENSSNFKLHASGHATKQELQLMLKLLKPKYLLPIHGEFKMFRSVQKAAEEVGFDKEN
VVIVKNGDILHLVQGELFYTDQCFVADPVYIEGSKTSKSSAQVLKERQILSEDGIVTVIL
TINQELHEVNNIPIIVTRGCFFAKESGSFITKMSYAIRQAVNEELKKYKNHAKKINQNLI
SKICKNIVSYYVWRNKRRNPYIITLIQEL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgattcatgaattagtaaaaccaattccaaataaagaacctactaaaatttttgcacta
ggtggtcttgaagaaattggcaaaaacatgtacggtattgaatataaagatgatttaatc
attattgattgtggtattaaatttgctgataatgaattattaggaattgatggcattatt
gctaatttcacttatttacacgaaaatgctcataagattaaagcagtttttatcactcat
ggtcatgaggaccacattggtggcattccttacttattaaaagaatttaacattcctgtt
atttatgctccgaagatggcatctgaatttattcttcgaaaacttcaagaacacaaagat
gctaaaccaactaaaatcgaagtgtatacggatgatactgttgtcaaaaccaaacacttt
aaaattgatttttaccgtgtgaatcactccattcccgattcgtttggcatctgtgtgcaa
acgcctaacgggaacattgttgaaagcggtgattttcgttttgattttcaagcaaaaggt
gaagaatttaatttacaaaaagttgctgaaattgcgtcgcgaaaagttgctttattttta
agtgaaacaaccaatgctgaaattcctggttttagttctagtgaagaaaacatttatgca
aatatcaataagattatcaaagaagcgattggtcgcgttattttgacaacctttgcttcc
aatacaacacggattaataaagttattgaaattgcgttaagtttaggtcgaaaaatctgc
ttattgggtaaatcaatggaagcaaatgttgccatttcgcgaaaagtgggctatatcaat
atgagtgatactgatttagttagttcgcgagatattaaaaaatatcctgatgaaaatatt
atgattttatgtactggttcgcaaggcgaagaactagcggctttaaacatgatggcacgt
ggcaaacacccatgagttagtttaaaaccgactgatacgttgattatgtcatccaacccc
attcctggcaattacgctgatgttgaatacttaattaatgatttgtctaaatatggtgtt
aacgtctttgaaaattcgtcaaattttaaactacacgcatcaggacatgctactaaacaa
gaattacagttaatgcttaaattattgaagccaaaatatttattaccaattcatggcgag
tttaaaatgtttcgttccgttcaaaaagccgctgaagaagtcggctttgacaaagaaaac
gtggtgatcgttaaaaacggagatattttgcacttagttcaaggtgaactgttttatacc
gatcaatgttttgttgctgatccggtttatatcgaaggtagtaaaacctctaaaagttca
gctcaagttttaaaagaacgccaaattttaagtgaggatggtattgttactgtaatctta
acgattaatcaagaattacacgaagttaataacattccgatcattgttacccgtggctgt
ttttttgccaaagaatcaggctcttttattaccaaaatgagttatgcaatcagacaagcg
gttaatgaagaactcaaaaagtataaaaatcacgccaaaaaaattaatcagaacctaatt
tcaaaaatttgcaaaaacattgttagttattacgtttgacgtaacaaacgacgtaaccct
tatattattacgctcatccaagaactttaa
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