KEGG   Mycoplasma amphoriforme: MAMA39_02110
Entry
MAMA39_02110      CDS       T06380                                 
Name
(GenBank) unnamed protein product
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mamp  Mycoplasma amphoriforme
Pathway
mamp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mamp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MAMA39_02110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mamp03019]
    MAMA39_02110
Messenger RNA biogenesis [BR:mamp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MAMA39_02110
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 I-HmuI_NUMOD-like Lactamase_B_6 Sulf_coat_C
Other DBs
NCBI-ProteinID: CDN40334
UniProt: A0A292IHB3
LinkDB
Position
complement(284098..285807)
AA seq 569 aa
MIHELVKPIPNKEPTKIFALGGLEEIGKNMYGIEYKDDLIIIDCGIKFADNELLGIDGII
ANFTYLHENAHKIKAVFITHGHEDHIGGIPYLLKEFNIPVIYAPKMASEFILRKLQEHKD
AKPTKIEVYTDDTVVKTKHFKIDFYRVNHSIPDSFGICVQTPNGNIVESGDFRFDFQAKG
EEFNLQKVAEIASRKVALFLSETTNAEIPGFSSSEENIYANINKIIKEAIGRVILTTFAS
NTTRINKVIEIALSLGRKICLLGKSMEANVAISRKVGYINMSDTDLVSSRDIKKYPDENI
MILCTGSQGEELAALNMMARGKHPWVSLKPTDTLIMSSNPIPGNYADVEYLINDLSKYGV
NVFENSSNFKLHASGHATKQELQLMLKLLKPKYLLPIHGEFKMFRSVQKAAEEVGFDKEN
VVIVKNGDILHLVQGELFYTDQCFVADPVYIEGSKTSKSSAQVLKERQILSEDGIVTVIL
TINQELHEVNNIPIIVTRGCFFAKESGSFITKMSYAIRQAVNEELKKYKNHAKKINQNLI
SKICKNIVSYYVWRNKRRNPYIITLIQEL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgattcatgaattagtaaaaccaattccaaataaagaacctactaaaatttttgcacta
ggtggtcttgaagaaattggcaaaaacatgtacggtattgaatataaagatgatttaatc
attattgattgtggtattaaatttgctgataatgaattattaggaattgatggcattatt
gctaatttcacttatttacacgaaaatgctcataagattaaagcagtttttatcactcat
ggtcatgaggaccacattggtggcattccttacttattaaaagaatttaacattcctgtt
atttatgctccgaagatggcatctgaatttattcttcgaaaacttcaagaacacaaagat
gctaaaccaactaaaatcgaagtgtatacggatgatactgttgtcaaaaccaaacacttt
aaaattgatttttaccgtgtgaatcactccattcccgattcgtttggcatctgtgtgcaa
acgcctaacgggaacattgttgaaagcggtgattttcgttttgattttcaagcaaaaggt
gaagaatttaatttacaaaaagttgctgaaattgcgtcgcgaaaagttgctttattttta
agtgaaacaaccaatgctgaaattcctggttttagttctagtgaagaaaacatttatgca
aatatcaataagattatcaaagaagcgattggtcgcgttattttgacaacctttgcttcc
aatacaacacggattaataaagttattgaaattgcgttaagtttaggtcgaaaaatctgc
ttattgggtaaatcaatggaagcaaatgttgccatttcgcgaaaagtgggctatatcaat
atgagtgatactgatttagttagttcgcgagatattaaaaaatatcctgatgaaaatatt
atgattttatgtactggttcgcaaggcgaagaactagcggctttaaacatgatggcacgt
ggcaaacacccatgagttagtttaaaaccgactgatacgttgattatgtcatccaacccc
attcctggcaattacgctgatgttgaatacttaattaatgatttgtctaaatatggtgtt
aacgtctttgaaaattcgtcaaattttaaactacacgcatcaggacatgctactaaacaa
gaattacagttaatgcttaaattattgaagccaaaatatttattaccaattcatggcgag
tttaaaatgtttcgttccgttcaaaaagccgctgaagaagtcggctttgacaaagaaaac
gtggtgatcgttaaaaacggagatattttgcacttagttcaaggtgaactgttttatacc
gatcaatgttttgttgctgatccggtttatatcgaaggtagtaaaacctctaaaagttca
gctcaagttttaaaagaacgccaaattttaagtgaggatggtattgttactgtaatctta
acgattaatcaagaattacacgaagttaataacattccgatcattgttacccgtggctgt
ttttttgccaaagaatcaggctcttttattaccaaaatgagttatgcaatcagacaagcg
gttaatgaagaactcaaaaagtataaaaatcacgccaaaaaaattaatcagaacctaatt
tcaaaaatttgcaaaaacattgttagttattacgtttgacgtaacaaacgacgtaaccct
tatattattacgctcatccaagaactttaa

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