Mycoplasma amphoriforme: MAMA39_05630
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Entry
MAMA39_05630 CDS
T06380
Name
(GenBank) unnamed protein product
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mamp
Mycoplasma amphoriforme
Pathway
mamp03420
Nucleotide excision repair
mamp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAMA39_05630
03430 Mismatch repair
MAMA39_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamp03400
]
MAMA39_05630
Enzymes [BR:
mamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAMA39_05630
DNA repair and recombination proteins [BR:
mamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAMA39_05630
MMR (mismatch excision repair)
Other MMR factors
MAMA39_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
CDN40680
UniProt:
A0A292IIH0
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All DBs
Position
796640..798832
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AA seq
730 aa
AA seq
DB search
MDLNIFKLNEVQKNVVSHSTGPALVIAGAGTGKTRVLTARIAYLVGHFGISPHRILAITF
TNKAAEEMKNRISRYLPDISFPFIHTFHAFSLRFLKEEIYHLDYNSSFNVIDEISQRSII
NDLYRLHNFEKSLLKTKESLDYIDTIKAANGDFKTSIENIKLKNKLSPSQCDLLKSLLNH
YQNHLKKNNLVDFNDLLNFTYEILSTNEEVKKKWIKRFDCILIDEFQDTNKVQYEIAKFL
AISHQNIFVVGDPDQSIYSWRGADEAIIEKFKQTFPNVKTFVLEENYRSSQQILNVANDL
IKNNYTVNIKNLWSHNKSGSVVKYYAAFSQEEEAFWVANQIKNLTEHQVKNQDIVILYRI
NSWSRSFEQALIKLKIPYFIYGGFKFYERQEIKDIIAYLKVIAFKDEISLKRIINVPSRK
VASRTIDAIDQYAAKLNVSFYDAMKNVQSLDIYSIAKKNIHNFYFELQEWRKKVNNGLFA
LTDDIITKTNYLSQFDPVKEKDRHENIKELLNSIQTYENDHPNASLSDYLQDISLYTSID
EKEQRDSVRLMTVHSAKGLEFNYVFVVGLNERIFPIYRNSEDTESNEIKEERRIFYVAIT
RAKKELTITSALGFSYASSTPNQLSRFIDEIDRSHLNIINLDKIAMWKQKNASSNQFGDS
SWPRLKVLQKYEHLMANAPNFRVGEVLDHDFFGEGVVVEVLKRTVKIAFNPKFGVKEILS
VSATLKRRKN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaatattttcaaattaaatgaagtacaaaaaaatgtggtttcgcacagcact
ggccctgctttggtaattgctggggctggtactggtaaaacgagagtattaaccgctcgc
attgcctatttggttggtcatttcgggattagtccgcaccgaattttagcgatcactttt
accaataaagcggctgaagaaatgaaaaatcgaattagtcgttatttgcccgatattagt
ttcccctttattcatactttccacgccttttcgttaagatttttaaaagaagaaatttat
catttagactataattcttcgtttaatgttattgatgaaattagccaacgcagtattatt
aacgatttataccgcttacataatttcgaaaaaagtttattaaaaacgaaagaatcatta
gattatatcgatacaattaaagcagctaatggcgattttaaaactagcattgaaaacatc
aaattaaaaaataaattatcaccatcacaatgtgatttgcttaaaagtttattaaatcat
taccaaaatcatttaaaaaaaaataatttagtcgactttaatgatttacttaatttcacc
tatgaaattttatccacaaacgaagaagttaaaaaaaagtgaatcaagcggtttgattgc
attttaattgatgaatttcaagataccaataaagttcaatacgaaattgctaaatttcta
gcaataagtcaccagaatatctttgttgtgggcgatcctgatcaatcaatctattcatga
cgtggtgcagatgaagcgattattgaaaaatttaaacaaacatttcctaacgttaaaacc
tttgtattagaagaaaactaccgttcttcacaacaaatcttaaatgtggctaatgatttg
ataaaaaataattataccgtaaatattaaaaacttatggtcgcacaataaaagcggaagt
gtggtgaaatattatgctgctttttcacaagaagaagaagcgttttgagttgctaatcaa
attaaaaatttaaccgaacatcaagttaaaaatcaagatattgtaattttataccgcatc
aattcgtgatcgcgaagttttgaacaagccttgattaagttaaagattccttactttatt
tatggtggttttaagttttacgagcgccaggaaattaaagatattattgcttatttaaaa
gttattgcatttaaggatgaaattagtttaaaaagaattattaatgttccctcccgaaaa
gttgcatcaagaacgattgatgcaattgaccagtatgctgcaaaactaaacgtcagtttt
tacgatgcgatgaaaaatgttcaatcccttgacatttacagtattgctaaaaaaaacatt
cataacttttattttgaattgcaagaatgaaggaaaaaagtcaataatggtctgtttgct
ttaactgacgacattatcaccaaaaccaattatttatctcaatttgatccagttaaagaa
aaagaccgtcacgaaaacattaaagagctacttaactcaatccaaacttatgaaaatgac
catcctaatgcttccttatcagattatcttcaagacatttcgctatacacttcaattgac
gagaaagaacaacgtgattcggtccgcttgatgaccgtccatagtgctaaaggacttgag
tttaattacgtttttgttgtgggtctaaacgaacggatctttccgatttatcgaaatagt
gaagatactgagtcgaatgaaattaaagaagagcgccggatcttttatgttgcaattacg
cgagctaaaaaagaattaaccatcacttcggcattaggttttagttatgctagcagcacg
ccaaaccaactatcgcggtttattgatgaaattgaccggtcgcacctgaacatcattaat
cttgataaaattgcgatgtgaaaacaaaaaaatgcatcttctaaccaatttggcgactct
tcctgaccgcgtttgaaagtgttgcaaaaatacgaacatttaatggctaatgcacctaat
tttcgtgtgggcgaagttttagatcatgatttttttggcgaaggcgttgttgttgaagtt
ttaaaacgaacggtgaaaattgcttttaatccgaaatttggtgtaaaggaaatccttagt
gtttcggctactttaaaacgtaggaaaaactaa
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