Mycoplasma amphoriforme: MAMA39_05890
Help
Entry
MAMA39_05890 CDS
T06380
Name
(GenBank) unnamed protein product
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mamp
Mycoplasma amphoriforme
Pathway
mamp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MAMA39_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamp03400
]
MAMA39_05890
Enzymes [BR:
mamp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MAMA39_05890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MAMA39_05890
DNA repair and recombination proteins [BR:
mamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MAMA39_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
C1_2
V-set
Motif
Other DBs
NCBI-ProteinID:
CDN40706
UniProt:
A0A292IJC6
LinkDB
All DBs
Position
complement(831913..832743)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVQTVVNELNLSVLNKKITGVKVHVAKLLKNSTVAQFQAFLTGEKIEKISRKGKY
IIFNLTSAKKMVSHLRMEGKYFFENQSTPYDHKHVLVQIEFKNEVLRYHDTRRFGTFNIY
ENDDHLHSNELAKIALDPIDPQFNGAYLHNKIKGRTRAIKTILLDQSIVSGIGNIYADEI
LFACQINPSTPAVKITLKECELLAKKAKEILLWAIECNGTTIASYKFKKGHIGSFQEHLK
VHTKQNKPCQFCKTKITKIKVNGRGTYFCSHCQILK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaagttcaaaccgttgttaatgaattaaaccttagtgttttaaat
aaaaaaattaccggtgtaaaagtccacgttgcaaagttattaaaaaatagtaccgttgca
caatttcaagcatttttaactggtgaaaaaattgaaaaaattagccgaaagggcaagtat
ataatttttaatttaactagtgctaaaaagatggtttcgcacttgcgaatggaaggaaaa
tacttttttgaaaaccaaagtacaccttatgatcacaaacacgttttggttcaaattgaa
tttaaaaatgaggttttacgataccatgacaccagacggtttgggacttttaatatttat
gaaaatgatgaccacttacattcgaatgaattagcaaaaatcgcgttagatccgattgat
ccgcagtttaacggtgcttatttacataacaaaattaaaggccgaacaagggcaattaaa
accattttgctagaccaaagcatcgtttcaggaatcggtaatatttatgctgatgaaatt
ttgtttgcctgtcaaattaacccttcaacaccagcagttaaaatcacattaaaagaatgc
gaattgcttgctaaaaaagcgaaagaaatcttattatgggcgatcgaatgtaacggcaca
acaattgcttcttacaaattcaaaaaaggccatattggcagttttcaagaacacttaaaa
gttcatacaaaacaaaacaaaccgtgccaattttgcaaaacaaaaattaccaaaatcaaa
gttaacggccggggcacttatttttgctcacattgtcaaatccttaaatag
DBGET
integrated database retrieval system
