Micavibrio aeruginosavorus EPB: A11S_1067
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Entry
A11S_1067 CDS
T02517
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
man
Micavibrio aeruginosavorus EPB
Pathway
man03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
man00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A11S_1067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
man03019
]
A11S_1067
03016 Transfer RNA biogenesis [BR:
man03016
]
A11S_1067
Enzymes [BR:
man01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A11S_1067
Messenger RNA biogenesis [BR:
man03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A11S_1067
Transfer RNA biogenesis [BR:
man03016
]
Prokaryotic type
tRNA degradation factors
A11S_1067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGH97885
UniProt:
M4VHC2
LinkDB
All DBs
Position
complement(1093873..1096020)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNIYRKEFELGGKKVVLETGKIARQADGAVMATMGGTTVLCTVVGARSLREGQDFFPLS
VHYQEKAYAAGKIPGGFFKREGRPSEKEVLVSRLIDRPVRPLFPEGFLNEVQVIATVVAH
DMENDPDIVAMIGVSAALTISGIPFMGPIGAARVGYVNGQYVLNPTLSERTNSVLDLVVA
GTAEGVLMVESEAQELSEEVMLGAVMFGWNSFQTVIKNIIGLAEMCAKEPWDVPVARPEV
VEMTKAMKAKFEAPLSKAYLEPIKQTRYELVGELKKQAVEEFVSEEKNLSKETVAAAFKT
LEADVVRGRILKEGMRIDGRDTKTIRPIVAEVGVLPRAHGSALFTRGETQALVVTTLGTG
QDEQIMDALEGEYKQRFMLHYNFPPYSVGEAGRMSSPGRREIGHGKLAWRAINPLLPKAE
EFPYTVRNVSEITESNGSSSMASVCGSSLAMMDAGVPLARPIAGIAMGLIKEGSDFAVLS
DILGDEDHLGDMDFKVAGTEKGVTALQMDIKITSITEEIMTIAVKQAREGRLHILGEMAK
ALTSARTEMSEYAPQIVTLTVPKEKIREVIGTGGKVIREIVEKTGTKIDIEDDGTIKVAA
SDAKAIEEAVRIIRGITDDPEVGAIYDGKVVKTTDFGAFVNFMPGKDGLVHISELATQRV
AATTDVVKEGDMVKVLLIGFDDRGKIKLSMKRVDQQTGEQIAIEERKPRGEREAG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatctaccgtaaagaattcgaactgggcggcaaaaaagtcgttctcgaaacc
ggcaaaatcgcccgtcaagctgacggtgccgtgatggccaccatgggcggcacgaccgtt
ctgtgcaccgttgttggcgcacgcagcttgcgcgaaggccaggatttcttccccctgtcc
gttcactatcaggaaaaagcatacgccgccggtaaaatcccgggtggcttcttcaaacgc
gaaggccgcccgagcgagaaggaagtgctggttagccgcctgatcgaccgtccggtgcgc
ccgctgttcccggaaggcttcctgaacgaagttcaggttatcgccaccgtggttgcacac
gacatggaaaacgatccggatatcgtcgcaatgatcggcgtttccgctgctctgaccatt
tccggtatcccgttcatgggcccgattggcgccgcacgcgttggctacgttaacggccaa
tacgttctgaacccgaccttgtccgaacgcacgaactctgttctggatctggttgtggcc
ggtaccgccgaaggcgttctgatggttgaatccgaagcccaggaactgtccgaagaagtc
atgctcggcgcggttatgttcggctggaacagcttccagaccgtcattaaaaacattatc
ggcctggccgaaatgtgcgcgaaagagccttgggatgtgcccgttgcccgcccggaagtg
gtcgaaatgaccaaagccatgaaggcaaaattcgaagctccgctgtccaaggcctatctg
gagccgatcaagcaaacccgttatgaactggttggcgaactgaagaaacaagccgttgag
gaatttgtttccgaagagaaaaacctgtccaaggaaaccgtcgccgccgcgttcaaaacg
ttggaagccgacgtggtccgtggccgcatcctgaaagaaggcatgcgtatcgatggccgt
gacacgaaaaccattcgtccgatcgtggccgaagttggtgttctgccgcgcgcacacggt
tccgcactgttcacccgcggcgaaacccaggcactggtcgtcaccacgctgggcaccggt
caggacgagcagatcatggacgcgctggaaggcgaatacaaacaacgtttcatgctgcac
tacaacttcccgccctattccgttggtgaagccggccgcatgagcagcccgggccgccgc
gaaatcggtcacggtaaactggcatggcgcgcaatcaacccgctgctgccgaaggctgag
gaattcccgtacaccgttcgtaacgtgtcggaaattaccgaatccaacggttcatcctcc
atggcgtccgtttgcggttcgtccctggcgatgatggatgcgggtgttccgctggcacgc
ccgatcgcgggtattgccatgggcctgattaaagaaggctctgacttcgctgttctgtcc
gacattctgggtgatgaagatcacctgggcgacatggacttcaaagtggccggtacggaa
aagggcgtcaccgccctgcagatggacatcaagatcacctcgatcaccgaggaaatcatg
accatcgccgtgaaacaggcccgcgaaggccgcctgcacatcctgggcgaaatggccaag
gcattgaccagcgcacggaccgaaatgtccgaatacgcaccgcaaatcgtaacgttgacc
gtaccgaaagagaaaattcgcgaagtcatcggcacgggcggtaaagtcatccgtgaaatc
gttgaaaaaaccggcacgaaaatcgacatcgaagacgatggcacgattaaagtggccgcg
tccgacgcgaaagccatcgaagaagccgtacgcattatccgcggcatcaccgatgacccg
gaagttggcgcgatctatgacggcaaagttgtgaagaccaccgatttcggtgccttcgtc
aacttcatgccgggcaaagatggtttggttcacatttccgaactggccacccaacgcgtt
gccgccaccaccgacgtggtgaaagaaggcgacatggttaaggttctgctgatcggtttc
gacgatcgcggcaaaatcaaattgtccatgaaacgcgttgaccaacaaaccggcgaacaa
atcgcaatcgaagagcgcaaaccgcgcggcgaacgcgaagctggttaa
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