Methylomusa anaerophila: MAMMFC1_00998
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Entry
MAMMFC1_00998 CDS
T05819
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mana
Methylomusa anaerophila
Pathway
mana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAMMFC1_00998 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mana03019
]
MAMMFC1_00998 (recQ)
03400 DNA repair and recombination proteins [BR:
mana03400
]
MAMMFC1_00998 (recQ)
Enzymes [BR:
mana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAMMFC1_00998 (recQ)
Messenger RNA biogenesis [BR:
mana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAMMFC1_00998 (recQ)
DNA repair and recombination proteins [BR:
mana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MAMMFC1_00998 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BBB90350
UniProt:
A0A348AH02
LinkDB
All DBs
Position
complement(1107567..1109711)
Genome browser
AA seq
714 aa
AA seq
DB search
MLKQAQNLLQKYYGYPEFRSGQEKIIDSILNGRDTLAIMPTGAGKSVCFQIPALMFPGIT
LVISPLISLMKDQVDDLSGLGIPAAFINSSLSQRETDERIFRARRGDFKLIYVAPERLES
EKFCRLLAPLRLSLVAVDEAHCVSTWGHDFRPSYRGIRPFISSLPQRPVVAAFTATATRT
VRADMVSLLELANPSIFITGFNRENLSFTVLRGENKLAFVKNYAADHVDQSGIIYAATRK
EVDSVCAFLRSQGLAAGRYHAGMTDEERTWAQDEFVYDNIKVMVATNAFGMGIDKSNVRY
VLHYNMPKNLEAYYQEAGRAGRDGEPGECILLYSAQDVQVQKFLIEQSQNATEERKTYEY
RRLHDMMDYCHTTRCLRQYILHYFGETDVPAYCGNCGTCSDDREAVDITVDAQKIFSCII
RMKERYGVTLVADVLKGSKNKRVLQLKFDSLSTYGLLKDRSVEEIKDLINLLIAEGYLGL
AEGEYPVVKIKAKAIPVLKGQAAVTQKILRRRVKPVSENTLFDKLKALRREIAAGEGIPS
YIVFPDSTLREMGEQLPADMTALRQVKGVGEMKAARYGERFLAVIRDYAAGHGLVRPQVS
REDDISEKQADKTPSHLVTLEMYRQGIPLAEIAKSRGLKAVTIEDHLMRCAAEGQCLNWD
DFIPLQYEPMILAKINELGADRLRPLKDALPEEVSYLNIKAVIIKHRNRLTSTE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacaagcacaaaatttattgcaaaaatactatggttatcctgagttccgcagt
ggtcaggagaaaattattgacagcatattaaacggcagggatactttggccatcatgcct
accggggccggcaaatccgtatgttttcaaatcccggccctgatgtttccggggataacc
ctggttatttcaccgcttatttccctgatgaaagatcaggtggatgatttgagcggactg
ggcataccggctgcatttatcaacagttccctcagtcagcgggagacggatgaacgcatt
ttccgggcccggcggggagattttaagttgatctatgtggcgcctgagcggctggaatca
gagaagttctgccgcctgttggcgcctttgcggctgtcgttggtagcggttgatgaagcc
cactgtgtctcgacctgggggcatgatttccggccaagctaccgggggatcaggcctttt
atcagttctttgccccaacggccggtagtagcggcatttacggccacggcaacccggact
gtccgcgccgacatggtatcgctgctggaacttgccaatcctagcatcttcattaccggc
tttaaccgggagaacttgtcttttaccgttctgcggggcgaaaataagcttgcttttgtg
aaaaattacgcggccgatcatgtcgatcagtccggtatcatttatgccgccacccgtaag
gaagtggacagtgtgtgcgcatttttgcgcagccaggggctggctgccggcaggtatcat
gccggcatgaccgatgaggaacgaacgtgggcgcaggatgaattcgtgtatgacaatatc
aaggtgatggtggccaccaacgccttcggcatgggtattgacaaatccaatgtgcgttat
gtgctgcattataatatgcccaagaacttggaagcctattatcaggaagccggccgggcc
ggccgggacggtgagccgggggagtgtatcctcctctattcagcgcaggatgtgcaagta
cagaaattcctcatcgagcaatcgcaaaacgccactgaggaaaggaaaacttatgaatac
cggcggctgcatgacatgatggattactgccatactacccgttgtctcaggcaatatatc
ctgcattactttggcgagaccgacgttccggcttattgcggcaattgcggcacctgcagc
gacgaccgggaagcagtggatattactgtggacgcgcaaaaaatattttcctgcatcata
agaatgaaggagcgttacggcgtaacactggtcgcggatgttttaaaaggctcaaaaaat
aagcgggtgctgcaattgaaatttgatagtttgtcaacttatggtttgctcaaggatcgc
tcagttgaggagattaaggatctgattaatctgttgattgccgaaggctatctaggtctg
gccgagggggaatacccggtcgttaagatcaaagccaaggcaatacctgtactgaaaggt
caggctgcggtgacccaaaagattttgcgacggagggtaaaaccagttagcgagaatacc
ctgtttgacaagctcaaagccctgcggcgggagattgccgccggcgaaggcataccttcc
tatatcgtatttcccgacagcaccttaagagagatgggcgagcaactgcctgcggatatg
acggctctgcggcaagtcaaaggggtgggggaaatgaaagcggcccgctatggcgaacgg
tttttggctgttatccgggattacgccgccggccacggcctggtccggccgcaagtcagc
cgggaggatgacattagcgaaaaacaggcggataaaacccccagtcacctggtcacatta
gagatgtaccggcaagggatcccgctggcggaaatcgcaaaatcgcgggggctgaaagct
gttacgattgaggatcatctcatgcggtgtgctgcggaaggccagtgtttaaactgggat
gattttattccgttgcagtatgagccgatgatactggcgaaaattaacgagcttggcgcc
gaccggctcaggccgctgaaagacgctctgccggaagaagtcagctatttgaacatcaaa
gccgttatcataaagcaccgcaacagattgactagtacagaataa
DBGET
integrated database retrieval system
