Entry |
|
Symbol |
cshA_2
|
Name |
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
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KO |
|
Organism |
mana Methylomusa anaerophila
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mana00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAMMFC1_01144 (cshA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mana03019]
MAMMFC1_01144 (cshA_2)
03009 Ribosome biogenesis [BR:mana03009]
MAMMFC1_01144 (cshA_2)
Enzymes [BR:mana01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAMMFC1_01144 (cshA_2)
Messenger RNA biogenesis [BR:mana03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAMMFC1_01144 (cshA_2)
Ribosome biogenesis [BR:mana03009]
Prokaryotic type
rRNA helicases
MAMMFC1_01144 (cshA_2)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(1295536..1296945)
|
AA seq |
469 aa
MQKFKALGISNEIIRALNEMGFEEPTPIQLEGIPVLLEGKDLIGQAQTGTGKTAAFGIPL
IEKVKKHPGMVQGIVLTPTRELAIQVAEELNRIGQFTEIHALPIYGGQDIQRQIKALKRH
PQIIVATPGRLMDHMRRGTIKLQDTQMVVLDEADEMLNMGFIEDIEQILSTTSDERQTLL
FSATMPRPIQNLAQRFLHDPALIKIKAKEITIPLVEQHYMEINDRQKFDVLCRLLDIQSP
ELSIVFGRTKRRVDEVSEALKKRGYSAEGIHGDLTQSKRDAVLRQFREGIVDILVATDVA
ARGLDVSGVTHVYNFDLPQDPESYVHRIGRTGRAGQPGLALTFVISRELEHLHSIEQTTK
RKILRMPVPTMADAVEGQQRLTVEKLLNQVEEGNYDHYKGRAEELLTEMDSVSLLAAALK
MLTKESHSTPVKITEELPVRVRTYGGNRRPSNAKKVVPKITPRNNSWKY |
NT seq |
1410 nt +upstreamnt +downstreamnt
ttgcaaaaattcaaagcattaggaattagtaatgaaatcattagagcactaaacgaaatg
ggatttgaggaacctacaccgatacaactagaaggtattcctgttctgcttgagggtaaa
gacctcattggacaggcccaaaccggcacagggaaaacggcagcattcggcattccgtta
attgaaaaggtaaaaaaacatccgggaatggttcaaggaattgttttaacccctactcgt
gaacttgctatacaagtagcggaagaactgaatagaatcgggcagtttacagagattcat
gcgctcccgatatacggaggccaagacattcagcggcaaattaaagccttgaaaagacat
ccccaaatcatcgtagcgacgccaggacgtctgatggaccatatgaggcgtgggacaatt
aagcttcaagacacccagatggtcgttttagatgaagctgatgaaatgctgaacatgggg
tttatagaagatatagaacagattttaagcacaacctccgatgaacgccaaacactcctc
ttctctgctaccatgcccagaccaattcagaacctggcccaacgttttttacatgatccg
gccttaataaaaatcaaagccaaggaaataaccattccgttggttgagcaacactacatg
gaaatcaatgaccgccaaaagtttgatgttttatgtcgcctgctggatatccagtctccc
gaactttcaatcgttttcggcaggacaaaacgacgtgttgatgaagtttcagaggcgcta
aaaaaacgtggctattctgctgagggaattcatggggacctaacacagtccaagagggat
gctgtcctacggcaatttagagaaggaattgttgacatccttgtcgctactgacgtcgct
gcccgcggtctggatgtcagtggagtcactcatgtttataactttgatctcccgcaagac
cccgagagctacgttcatcgaattggccgaactggccgtgcgggacaaccgggtttagcc
ttgacttttgtaatttctcgcgaactagagcatcttcattcaatcgaacaaactactaaa
cgcaaaatcctccggatgcccgtaccgaccatggcggatgcggtagaaggacaacagcgc
ttaacagtagaaaaattactgaatcaagtcgaagagggaaactatgaccactataaaggc
agggctgaagaactccttacagaaatggattccgtctctttacttgcggccgcactaaaa
atgcttaccaaagagtcacacagtactccggtaaaaattactgaagagttgccagtacgg
gtgcgaacttatggtggaaacagaagaccgtccaatgcaaaaaaagtagtcccgaaaatc
acaccgcgtaataactcctggaaatattaa |