KEGG   Methylomusa anaerophila: MAMMFC1_01144
Entry
MAMMFC1_01144     CDS       T05819                                 
Symbol
cshA_2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mana  Methylomusa anaerophila
Pathway
mana03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MAMMFC1_01144 (cshA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mana03019]
    MAMMFC1_01144 (cshA_2)
   03009 Ribosome biogenesis [BR:mana03009]
    MAMMFC1_01144 (cshA_2)
Enzymes [BR:mana01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MAMMFC1_01144 (cshA_2)
Messenger RNA biogenesis [BR:mana03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MAMMFC1_01144 (cshA_2)
Ribosome biogenesis [BR:mana03009]
 Prokaryotic type
  rRNA helicases
   MAMMFC1_01144 (cshA_2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: BBB90493
UniProt: A0A348AHE5
LinkDB
Position
complement(1295536..1296945)
AA seq 469 aa
MQKFKALGISNEIIRALNEMGFEEPTPIQLEGIPVLLEGKDLIGQAQTGTGKTAAFGIPL
IEKVKKHPGMVQGIVLTPTRELAIQVAEELNRIGQFTEIHALPIYGGQDIQRQIKALKRH
PQIIVATPGRLMDHMRRGTIKLQDTQMVVLDEADEMLNMGFIEDIEQILSTTSDERQTLL
FSATMPRPIQNLAQRFLHDPALIKIKAKEITIPLVEQHYMEINDRQKFDVLCRLLDIQSP
ELSIVFGRTKRRVDEVSEALKKRGYSAEGIHGDLTQSKRDAVLRQFREGIVDILVATDVA
ARGLDVSGVTHVYNFDLPQDPESYVHRIGRTGRAGQPGLALTFVISRELEHLHSIEQTTK
RKILRMPVPTMADAVEGQQRLTVEKLLNQVEEGNYDHYKGRAEELLTEMDSVSLLAAALK
MLTKESHSTPVKITEELPVRVRTYGGNRRPSNAKKVVPKITPRNNSWKY
NT seq 1410 nt   +upstreamnt  +downstreamnt
ttgcaaaaattcaaagcattaggaattagtaatgaaatcattagagcactaaacgaaatg
ggatttgaggaacctacaccgatacaactagaaggtattcctgttctgcttgagggtaaa
gacctcattggacaggcccaaaccggcacagggaaaacggcagcattcggcattccgtta
attgaaaaggtaaaaaaacatccgggaatggttcaaggaattgttttaacccctactcgt
gaacttgctatacaagtagcggaagaactgaatagaatcgggcagtttacagagattcat
gcgctcccgatatacggaggccaagacattcagcggcaaattaaagccttgaaaagacat
ccccaaatcatcgtagcgacgccaggacgtctgatggaccatatgaggcgtgggacaatt
aagcttcaagacacccagatggtcgttttagatgaagctgatgaaatgctgaacatgggg
tttatagaagatatagaacagattttaagcacaacctccgatgaacgccaaacactcctc
ttctctgctaccatgcccagaccaattcagaacctggcccaacgttttttacatgatccg
gccttaataaaaatcaaagccaaggaaataaccattccgttggttgagcaacactacatg
gaaatcaatgaccgccaaaagtttgatgttttatgtcgcctgctggatatccagtctccc
gaactttcaatcgttttcggcaggacaaaacgacgtgttgatgaagtttcagaggcgcta
aaaaaacgtggctattctgctgagggaattcatggggacctaacacagtccaagagggat
gctgtcctacggcaatttagagaaggaattgttgacatccttgtcgctactgacgtcgct
gcccgcggtctggatgtcagtggagtcactcatgtttataactttgatctcccgcaagac
cccgagagctacgttcatcgaattggccgaactggccgtgcgggacaaccgggtttagcc
ttgacttttgtaatttctcgcgaactagagcatcttcattcaatcgaacaaactactaaa
cgcaaaatcctccggatgcccgtaccgaccatggcggatgcggtagaaggacaacagcgc
ttaacagtagaaaaattactgaatcaagtcgaagagggaaactatgaccactataaaggc
agggctgaagaactccttacagaaatggattccgtctctttacttgcggccgcactaaaa
atgcttaccaaagagtcacacagtactccggtaaaaattactgaagagttgccagtacgg
gtgcgaacttatggtggaaacagaagaccgtccaatgcaaaaaaagtagtcccgaaaatc
acaccgcgtaataactcctggaaatattaa

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