Methylomusa anaerophila: MAMMFC1_01192
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Entry
MAMMFC1_01192 CDS
T05819
Symbol
sbcC_1
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mana
Methylomusa anaerophila
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mana03400
]
MAMMFC1_01192 (sbcC_1)
DNA repair and recombination proteins [BR:
mana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAMMFC1_01192 (sbcC_1)
Archaeal homologous recombinant proteins
MAMMFC1_01192 (sbcC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_27
nSTAND_NTPase5
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BBB90541
UniProt:
A0A348AHJ3
LinkDB
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Position
complement(1347688..1351329)
Genome browser
AA seq
1213 aa
AA seq
DB search
MRPLTLKIAGLHSFREEQEVQFDKLSELGVFGIFGPTGSGKSTILDAITLALYGVVVRAG
RRTQGILNHGENHLKVAFTFALQSGQTPKVYRVERRYGRKDQLAVTNTYSRLTEILADGS
ETVAADKDREVTEQITALLGLKEEDFTRAVVLPQGKFAEFLNLSGKERREMLQRLFSLEQ
YGHILTNRVNERFKAVETGYIEADSEQKGLGDASPQAVAAAESALIAARQAEVKCAGILA
AVQVRHAAAEKIHSLQAELRIKEQELQDHRSREGEIAHINKKLELSAKAGSVMPAALQYK
EILAEERAACSFKEQAIANIKALAAEIRQLGDNYEQARQTRIEAEPKLVEQKAGLEAALR
LEPDIVQLEGEVNKLGYDFGRKKRAYEQHVQEINILSARKDEITNQIQQGEAGLIELTVP
AEYRQLVQAGREKAAEAARNIEVLEQSRLALTRRRQDCQRAVKDKALAGEKMERISNLLR
EKESEAERIQKDCPAGEEALVEQELRLAGWGNLVGQLLDRTGEAEAESSLVQQIDRELNE
NRQRQTYLEEEKQKATHHLQLLQRELELQVATDNLAVAARLAEGLKEGEPCPVCGSVHHP
QPAAISDAAATAADRPELEQDIAAMQSRVDAINDNLAETGNRIIALATKHDLVAAKLKTL
QDTLLALTGKLTAELCLAGEYTLQQLRSQVEAARKQLTYSRGLLKEWKAKSAQVQELISE
LRDTLAKTAAEMAVAGQRVEMTQSELALAEGELEKIRQELSHSVTDLAAALRQLGVDISP
AEDARQVIRQMAAISESVSRRDKTAEELQMKIAALRKTGEDCQTKLDQLHKEASFCQSGL
AALTAQRKAAEDNLAARKKELGQITQGIPVNELIAKVSQELAIVRQNEATAQETFERAQE
LYSEGEQSKVRAETRWLDISRRLKDSDNTLQAKLAAEGFIELAAAEAAFLPPAAAEECNR
QVQEYLRAEQKLLAQREQIVRNLAGRRLTVGEWESLGQELQAAMDGKNAATERRVEADKE
YKDLAIRNLRWAELEKSRVRLKDQLDCLQTLKNLLRGNVFVEFLAQEQMEMVARQASERL
KEITRNRYALELASDGGFLIRDDANGGVKRPVATLSGGETFQTSLALALALSTHIQLKGK
YPLEFFFLDEGFGSLDQNALDVAISTLERLHMERMTIGIISHIAELQQRMQRRLMVEPAE
TAGHGTWVRIETA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgctcacattgaaaattgccggcctgcacagctttcgcgaagaacaggaggtt
cagttcgacaaattgtcggaactgggggttttcggcatattcgggccgacaggcagcggc
aagtccaccatattggacgctataacgcttgctttatacggggtggttgtcagggccggc
cgccggacgcaaggcatattgaatcatggcgaaaatcatctcaaagtcgcattcaccttt
gctttacagtcgggccaaacacctaaggtatatcgcgtggagcggcgctatggccgcaag
gatcaactggccgtgaccaatacctatagccgccttacggagatactggctgacgggagc
gagactgtcgccgccgataaggacagggaggtcacggagcagataaccgctctcctgggg
cttaaagaggaggatttcacccgggcggtggttttgccgcagggaaagttcgccgagttt
ttaaacttaagcggcaaggaacggcgggaaatgctgcagcggctgttttcgttggagcag
tatggccatattttgaccaatcgggtcaatgaacggttcaaagccgttgaaaccggctat
attgaagccgatagcgagcaaaaaggcttgggagacgcatcgccccaggcggtggcggct
gccgaaagtgctcttattgcggctagacaggcggaagttaaatgcgccggcatactggcg
gcggtgcaggtgcggcatgcggcagcggaaaaaatacattctttgcaggcagaactccgg
attaaggagcaagaacttcaagatcatcgttcccgagaaggggaaattgcgcacattaac
aaaaagctcgagctgtcagccaaggccggttcggttatgccggcagccctgcaatataag
gagatactggccgaggaaagagcagcctgcagttttaaggaacaggccatcgccaatatc
aaggcgttagcggcagaaatccggcaattgggagacaactacgaacaagcccggcaaacc
agaatagaggctgagcctaagctggtggaacaaaaagccgggctggaggcagcgctgcgt
ctggaaccggatatagttcagcttgagggggaagtaaataagctagggtacgattttggc
cggaaaaaaagggcttatgagcaacacgtgcaggaaattaatattctttcagcgcgaaag
gacgagatcaccaatcagatacagcagggagaagccgggttaatcgaattaactgtgccg
gcggaatatcggcaacttgttcaagcgggtcgcgaaaaggcggcggaagcagcgcgcaat
atagaagtgcttgagcagtcccggctggctttaacccggcgccggcaagattgtcagcga
gctgtgaaagacaaagcccttgccggcgaaaagatggagcgaatttccaatctcctgcgc
gagaaggaatcagaggcggaaaggattcagaaggattgtccggctggggaggaggctttg
gttgagcaggaactgcgccttgccgggtggggtaatctggttggccagttattggaccgg
actggggaggctgaggctgaaagcagtctggtgcaacaaatagaccgcgagttaaatgaa
aatcgccagcgccaaacttacttagaggaagaaaaacagaaagctacccatcacctgcaa
ttgctgcaaagggagctggagttgcaagtggctactgacaatttggcagtggctgcccgt
ctggccgaagggctgaaggaaggtgagccatgtccggtgtgcggctccgttcaccatccg
cagccggcggcgatatcagatgcggcagctaccgctgccgacaggccggaactggaacag
gatatcgccgctatgcagtcccgcgttgatgcaatcaacgataatctggctgaaaccggc
aacagaattattgctttggcgaccaagcatgacttggtggcggctaagctaaagaccttg
caagatacgctgctggcactgacgggaaagctgacagccgaattatgtcttgcgggagaa
tatactttacaacagcttcgttcccaagttgaggccgccaggaagcagcttacttactcc
agaggcctgttaaaagaatggaaagccaaaagcgctcaagtacaagagcttataagcgaa
ttgcgggacacattggccaaaaccgcagctgagatggcagtagccggacagcgggtggag
atgacccagtcggagctggctctggccgaaggagaattggaaaagatccggcaggaatta
agccattcggtaaccgatcttgcggccgctttacgccaacttggcgtcgatatttcaccg
gcagaagatgcccgtcaggtaataaggcagatggcggcgattagcgaatccgtctcccgc
cgggataaaacggcggaagaattgcaaatgaaaatagccgctttacgaaaaaccggcgaa
gattgtcagacaaaattggatcagttgcataaagaagcttccttctgtcagtccggcctg
gcggcgctaacggctcagcgtaaggcggcagaagataatcttgcggccaggaagaaggaa
cttggacagataacccaggggattccggtcaatgaactaattgccaaagtcagtcaggaa
ctggcaatagtccggcagaatgaagccacagcccaagaaacttttgagcgggcccaagaa
ctttatagcgaaggggaacagtccaaagtccgggccgagactcgctggctggatattagc
cgcaggctgaaagacagtgataatacattgcaagcgaaattggcggcggaagggtttatt
gagctggctgcggccgaggcagcttttctgccgccggccgcagcggaagaatgcaaccgg
caagtgcaagaatatcttagggctgagcaaaagctgctggcacaacgggagcaaattgta
cggaatcttgccggtcgccggctgactgttggggaatgggaaagtctggggcaggagctg
caggcggcaatggacggcaaaaacgcggcgacagagcggcgggtagaagcggataaggaa
tataaagacctggcaatccggaacctgcgctgggctgaactggagaaatcccgggtgagg
ttgaaggatcagctggactgtttgcaaacattaaagaacctcttgcgcggcaatgtgttt
gtcgaatttttagcgcaagaacagatggaaatggttgcccggcaagcgtctgagcggctc
aaggagattacccggaaccgctatgctttagaactggcgtcagacggcggttttctcatt
cgggacgacgccaacggcggggttaaacggcctgtagccaccctctccggcggggagacc
tttcagacttcgctggcgctggccctggcgttgtccacccacattcagcttaaggggaaa
tacccgctggaatttttcttccttgatgaaggtttcggttcactggatcaaaacgcgctg
gatgtggccatatcgacgctggaaagattgcacatggaacggatgaccatcggtatcatc
agtcatatagccgaattgcagcagcggatgcagcgccggcttatggttgagccggccgaa
acagccggtcacgggacgtgggttcgaatcgagacagcatga
DBGET
integrated database retrieval system
