Methylomusa anaerophila: MAMMFC1_02072
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Entry
MAMMFC1_02072 CDS
T05819
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mana
Methylomusa anaerophila
Pathway
mana03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAMMFC1_02072 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mana03021
]
MAMMFC1_02072 (rpoA)
03400 DNA repair and recombination proteins [BR:
mana03400
]
MAMMFC1_02072 (rpoA)
Enzymes [BR:
mana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAMMFC1_02072 (rpoA)
Transcription machinery [BR:
mana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAMMFC1_02072 (rpoA)
DNA repair and recombination proteins [BR:
mana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAMMFC1_02072 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBB91388
UniProt:
A0A348AJZ0
LinkDB
All DBs
Position
2257531..2258490
Genome browser
AA seq
319 aa
AA seq
DB search
MIEIEKPKIEIVEISDDNRYGKFVWEPLDRGFGITLGNSLRRVLLSSLPGAAVTSVKIEG
VLHEFSTIPDVREDVTDIILNLKELCLKTYTDEPKVLRIEVEGDAEVKAEDIITDPDVEI
LNPELHIATIGQGGRLFMELYVERGKGYVPADKNKKSDHVIGVIPVDSIFSPIVRVNYNI
TDTRVGNVTNYDKLTLEVWTDGSMRPEEAVSKAAGIMVSHLKMFQNIAGEPPEEDAEQGN
ISEEPAEGKNRTMEMTIEDLDLSVRSYNCLKRAGINTVAELVQKSEEDMMKVRNLGRKSL
EEVKKKLIEMGLALAETEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaaaccgaagatcgaaatagtagaaataagtgacgacaatcgttat
ggcaaatttgtgtgggaaccgttggatagaggatttggcatcactttgggcaacagcctc
cggcgggtacttttatcctcattgccgggtgctgccgtcacgagtgtcaaaattgagggt
gtgctacacgaattttctactatacctgatgttcgggaggacgtcaccgacattattttg
aaccttaaagaactgtgtctaaaaacttacactgacgaacctaaggtgctcaggatcgaa
gtagaaggagacgcggaagtcaaagcagaggatattattaccgatcctgatgtggaaatt
ctaaacccggaacttcacattgcaactatcgggcaaggtggaagattatttatggagctt
tatgtcgagcgaggcaaaggttatgtgcctgccgacaaaaacaagaaatccgaccatgta
atcggggtcatcccggttgattccatcttttctcctatcgttcgtgtgaactacaacatc
acagatacccgtgtaggtaatgtaaccaactatgacaaactgactttggaagtatggact
gatggcagtatgcgtcccgaggaagcggtcagcaaagccgccggtatcatggtgtcgcac
ttgaagatgtttcaaaatattgccggcgaaccgcccgaagaggatgcggagcaaggaaat
atttccgaagagccggccgagggcaagaatcgcacaatggaaatgaccattgaagatctt
gatctctcggtacgttcctataattgcttaaaacgagcaggtatcaatacagtggctgag
cttgtgcaaaagtcggaggaagacatgatgaaagttcgcaacttggggcgcaagtcactg
gaagaagttaagaaaaagctcattgaaatggggcttgcattagctgaaactgaagagtaa
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