Methylomusa anaerophila: MAMMFC1_02160
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Entry
MAMMFC1_02160 CDS
T05819
Name
(GenBank) bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mana
Methylomusa anaerophila
Pathway
mana03022
Basal transcription factors
mana03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MAMMFC1_02160
09124 Replication and repair
03420 Nucleotide excision repair
MAMMFC1_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mana03021
]
MAMMFC1_02160
03036 Chromosome and associated proteins [BR:
mana03036
]
MAMMFC1_02160
03400 DNA repair and recombination proteins [BR:
mana03400
]
MAMMFC1_02160
Enzymes [BR:
mana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MAMMFC1_02160
Transcription machinery [BR:
mana03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MAMMFC1_02160
Chromosome and associated proteins [BR:
mana03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MAMMFC1_02160
DNA repair and recombination proteins [BR:
mana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MAMMFC1_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
IMS_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
BBB91476
UniProt:
A0A348AK78
LinkDB
All DBs
Position
2344762..2347170
Genome browser
AA seq
802 aa
AA seq
DB search
MISSNLVRISVRTLVEWILRSGDLVFSLTAPARAVEGTKAHRKVQKSRTGEYQAEVALTY
TIEREDLVLEIGGRADGIFLNRGDEEAAAVIDEIKSTSRPLEAIEADQYPLHWAQAKCYA
FIYAAQNDLDTIGVQLTYYQLDSREIKEFCLFYPRGELAVFFHGLVEQYLFWARLLRDWI
KVRDESIAQINFPFVGYRPGQRELAVAVYKTIAAGRKLYAQAPTGAGKTMATIFPAVKAV
GSGLIEKIFFLTAKTVTRGLAEEAFAKLRLNGLVFKTVTLTAKDKICFKPGRECHPGECE
YANGHFDRVNGAIADIWREDCYTRATVEQYAGKHRVCPFEFSLDLALWADGVIGDYNYVF
DPRVYLRRFFDNDTGCNCCFLIDEAHNLVDRAREMFSAALLRRPFVHLRRASRQVLPRVS
KAAQAVGARLRQIGKTCLTGGEGEPVDFFVQKEALYDIHSVLRKFTNEVERWLLTGNQDQ
AGPELKTALLDQYFTALSYLRIAECYDERYVTYLEAVEDNDVKVRQFCVDPAKLLRAALQ
RGRAAIFFSATLTPLSYFAAVLGGNEDDGKIAVPSPFSPDNLCLMIAGRIATTYKSRAGT
YDRVVAAIAAAVSGKTGNYLVFFPSFQYLGEIYERFSYQYPRIRVIRQAVSMAEQERVAF
LDHFGRSGNRPPDETLVGFAVLGGIFGEGIDLVGERLSGAVIVGVGLPQIGNERDIIRDY
YNQVNSQGFEFAYMYPGMNKVLQAAGRVIRTEQDRGVVLLIDERFTGYRYKTLFPSEWRQ
GVKVADAAGITGVVGRFWQQGC
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattagcagcaacctggtccggatttcggtgcgcacgctggtggaatggattctgcgc
tccggggatctggttttttccctgaccgcgccggcccgggccgttgagggcacaaaggct
caccgcaaggtgcaaaagtcgcggacaggcgaatatcaagccgaagtagccttgacatat
accattgagcgggaagaccttgttttggagatcggcggccgggccgacgggatttttctt
aaccggggggatgaagaagcggcagcggttatcgatgaaataaagtcaaccagccgtccg
ttagaagcgattgaagccgaccaatatcccttacactgggcgcaggctaaatgttatgca
tttatttacgcggcgcagaatgatctggatactattggcgtccagttgacttactatcag
ctcgatagcagagaaatcaaggaattttgccttttctatcctcgcggggaattggccgtc
tttttccacggtctggttgagcaatacctgttttgggccagactgttaagggattggatc
aaggtgcgggatgagtccattgctcaaattaattttccttttgtcggctatcgtcccggc
cagcgggaattagcggtggctgtatataagacaatcgccgccggcaggaaactgtacgcg
caggcgcctaccggggcgggcaaaaccatggcgaccatatttcccgccgtcaaagcggta
ggttccggcctgattgagaagatatttttcttaaccgccaagacagtgacacggggattg
gcggaagaggcttttgccaagctgcggctgaacggtctggtatttaaaacagtcacttta
acggccaaggataaaatatgttttaaacccggcagggaatgtcacccgggcgagtgtgaa
tacgctaacgggcattttgacagggtgaacggagccattgccgacatttggcgggaggat
tgttacacgcgtgcgacggtggagcaatatgccggcaaacatcgggtctgtcccttcgag
ttttcccttgatttagcgctttgggctgacggtgttattggcgattacaattatgtcttt
gacccccgggtgtatttacggcgattttttgacaatgataccggctgcaactgctgcttt
ttgattgatgaggcgcataatctggtagacagggccagagagatgttttccgccgccctg
ctgcgccgtcccttcgtccatctcaggcgagccagccggcaggtattgccccgagtgtcg
aaagcggcccaggctgtcggcgcccggttgcggcagatcggcaagacctgcctgaccggc
ggggaaggcgaaccggtggatttttttgtgcagaaggaagctttatacgatatacattcg
gtgttgcgcaagtttactaacgaagttgaacgctggctgttaacggggaaccaggatcaa
gccggccccgaactgaaaacggcgttattggaccagtattttacagccctgagctacctg
cggattgccgagtgttatgatgaacggtatgtcacctatcttgaagccgttgaggataac
gacgtaaaggtccggcaattttgcgttgacccggccaaactgctgcgtgccgctcttcag
cgtgggcgtgccgccatctttttttcggcgacgttaacacccctttcctattttgccgct
gtgttgggcggcaacgaggatgacggcaagatcgccgtcccttcgccgttttcacctgac
aacctctgcctcatgattgccggcagaattgctaccacttataaatcccgggccggaacc
tatgaccgggtggtggcggccatcgcggcggcggtaagcggcaaaaccggcaactatctg
gtgtttttcccgtcattccagtatcttggggaaatatacgaacgtttctcttatcaatat
ccccgcatccgggtcatccggcaggctgtttcgatggcggaacaggaacgtgtggcgttc
ttggatcacttcggccgcagcggcaacagaccccctgacgaaacgctggtcggctttgcc
gtgcttggcggcattttcggcgaggggattgatcttgttggcgagcggttatccggggct
gtcattgtgggggttgggctgccccaaatcggcaatgagcgggatattatccgggattat
tataatcaggtaaatagtcagggattcgagtttgcctatatgtatcccggaatgaacaag
gtgctgcaagccgccgggcgggtaatcaggacggaacaggaccgcggcgtggtactgctc
attgatgaacgttttaccggctatcgctacaaaactttatttccgtccgagtggcggcag
ggggtgaaggtggcggatgcggcaggcatcaccggggtcgtaggtcgtttttggcaacag
ggatgctga
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