| Entry |
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| Symbol |
cshA_3
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| Name |
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
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| KO |
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| Organism |
mana Methylomusa anaerophila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mana00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAMMFC1_03818 (cshA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mana03019]
MAMMFC1_03818 (cshA_3)
03009 Ribosome biogenesis [BR:mana03009]
MAMMFC1_03818 (cshA_3)
Enzymes [BR:mana01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAMMFC1_03818 (cshA_3)
Messenger RNA biogenesis [BR:mana03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAMMFC1_03818 (cshA_3)
Ribosome biogenesis [BR:mana03009]
Prokaryotic type
rRNA helicases
MAMMFC1_03818 (cshA_3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4127890..4129470)
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| AA seq |
526 aa
MFKDSATFGDIPLSKKTISAITQMGFEEPSPIQSKTIPLVIAGNDVLGQAQTGTGKTAAF
GIPIMEKISELRQVQALVLTPTRELAIQVSEELAKIGKFKKIKTLPIYGGQAIDRQIRTL
KSGVQVVIGTPGRLLDHIRRGTIKLDHVNILVLDEADEMLDMGFIEDIESILEHVPKERQ
TLLFSATMPTEIMALADRYMHDRVTVTISKEQLTVPLIDQIYYETRDKLEGLCRVLDTEA
FGRLIIFCRTKKGVDDLVASLSARGYISDGLHGDLSQAQRDRVMKRFRDGKLDILIATDV
AARGLDIDQVTHVINFDIPQDPESYVHRIGRTGRAGKKGVAITFIQPREYRQLKLIEKQI
KTRIIRKQLPSPADILERQIEVIKEQLARTIAQGGFEAYSNLIADMAEDYDPIDIASAAL
KLFQEGFKEKSQSPEERVSFGNTGAEPGMVRLFINAGRIQKIQPQDIVRTIAEEADIEGS
VIGAINIYDKFTFVEVPEDVAERVLSVMNKNTIKGYRINIEPAKGR |
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| NT seq |
1581 nt +upstreamnt +downstreamnt
atgtttaaagattcagctacatttggcgatattccgcttagcaaaaaaactatatcggcc
attacgcaaatgggatttgaagaaccttcccccattcagagtaaaaccattcctttggtt
atagccggaaacgatgtgcttggccaggcgcaaacaggaaccggaaaaacggcagcgttt
ggcattcctattatggagaagatttctgaactccggcaagtacaggcccttgtactgact
cctacccgtgagctcgccatacaagtatcggaggaattagccaaaataggtaaatttaaa
aaaattaaaacattaccaatatatggtgggcaagcgattgaccggcagattagaactttg
aaatcgggagtgcaagtagtcattgggacacccggacgattgcttgatcacattcgccgc
ggcaccataaaacttgatcatgttaacattttagtacttgatgaagctgatgagatgctg
gatatgggatttattgaagatattgagagtattttggaacatgttcctaaagaacggcaa
acgttactattttctgctactatgccgacggaaatcatggcgctggcagacagatatatg
cacgaccgggtaaccgtaacgattagtaaagaacaactgaccgttcctttgattgatcag
atttattatgaaactcgcgacaagctggaaggattgtgccgggtgcttgataccgaagca
tttggtcgcctgattattttttgccgcacgaaaaaaggtgtggatgacttggttgcttca
ctatccgcccgcggatatatttctgacgggttgcacggcgatttgagccaagcgcaaaga
gaccgtgtgatgaaaaggttccgggatggaaaactggatatattgattgccactgatgtg
gcggccagagggctggacattgaccaagttacccatgttatcaattttgatattccgcaa
gatcccgagtcttatgtccatcgtatcggccgtaccggtagagccgggaaaaaaggtgtg
gcaataacctttattcagccgcgtgaataccggcaactcaaactgatcgagaaacaaatt
aaaacccgaattatccgtaagcaattaccttcacctgccgatatcctggaacgtcagata
gaagtaattaaggaacaattggctaggactattgcccaaggcggctttgaggcctatagc
aatctaattgcggatatggcggaagactatgatccaattgatattgcgtccgcagcgttg
aagctgttccaagaaggctttaaagaaaaatcgcaatcgccggaagagcgagtttctttt
ggcaataccggagctgaacccgggatggtgcgcttatttattaatgccggccggatacaa
aaaattcagccccaggatattgtgcgcacaattgccgaagaagctgatattgaaggtagc
gttatcggggcaatcaatatctatgacaaatttaccttcgtagaggttccggaagatgtt
gccgagcgtgttttgtccgttatgaacaagaataccataaaaggttaccggattaatatt
gagccggctaaaggcagataa |
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