Methylomusa anaerophila: MAMMFC1_03907
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Entry
MAMMFC1_03907 CDS
T05819
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mana
Methylomusa anaerophila
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mana03032
]
MAMMFC1_03907 (topA)
03400 DNA repair and recombination proteins [BR:
mana03400
]
MAMMFC1_03907 (topA)
Enzymes [BR:
mana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MAMMFC1_03907 (topA)
DNA replication proteins [BR:
mana03032
]
Prokaryotic type
DNA Topoisomerases
MAMMFC1_03907 (topA)
DNA repair and recombination proteins [BR:
mana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MAMMFC1_03907 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
Toprim_4
HypA
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BBB93198
UniProt:
A0A348AQ50
LinkDB
All DBs
Position
complement(4215901..4218072)
Genome browser
AA seq
723 aa
AA seq
DB search
MSKALVVVESPAKAKTIEKFLGKNYTVKASMGHLRDLPKSQFGVDIENNFEPKYINIRGK
GDLIKSLKEAAKNAGSIYLATDPDREGEAIAWHLAHLLNIPVVNACRIEFNEITKPAIQQ
AVKKPRPIDLSRVFAQQARRILDRIVGYKLSPLLWRKVRKGLSAGRVQSVAVRLICDREK
EIQNFVPEEYWTITAKLKEKSSSKPFDAELVSIDGQKISIQDETQASAAVTELSQAEYSV
ADVKKRERKRNPYAPFITSSLQQEAARRIGFTSRKTMTVAQQLYEGLDIGSSGHVGLITY
MRTDSTRVSELAQQDARQYIAGKHGTSYLPEKPPVYANKRSQDAHEAIRPTSVELPPEAL
ISHLTKDQLKLYTLIWERFIASQMTAAVYDTMTIEIMAGRYKFRATGSQLKFPGFLAAFS
HTGKGGAGSGETNEDSSISELDKDNLLPELTVGQKLKLAKLLPAQHFTEPPPRYTEASLV
KILEEKGIGRPSTYAPTIETIVTRGYVRRVEKKFEPTELGFVVVDLLKDYFKKIVDVEFT
AGMEDQLDDIADGDISWLEVLRQFYEPFNKDLVHAEEAIGHVELPVQVSDVKCENCGRMM
VIKQGRYGDFLACPGFPECRNTKPLVKETGAKCPKCQGAVVERRTKRGKTFYGCENYPAC
DFTTWDTPLAEKCPQCGSFMVRHRFKNGGVTSRCSNAACPGNQAAMRNDEEKSTKVKRGK
KSV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaggctttagtcgtagtagagtcaccagccaaagccaaaacgattgagaaattt
ctgggtaaaaactatactgttaaagcttcaatggggcatctcagggacttgcccaaaagt
caatttggtgttgatattgaaaataactttgagcctaaatatatcaatatcagaggtaaa
ggagatcttatcaagagtttgaaagaagcagccaaaaatgctggttctatatacctggca
acagaccccgaccgtgaaggggaagccattgcctggcatttggctcacttgcttaatatt
ccggtagtcaatgcttgccgtatcgaatttaacgaaattaccaaacctgctatccagcag
gcggtaaaaaaaccgcggcccattgatttatcccgcgtgtttgctcaacaagcaagaaga
atactggatcgaatcgtcggctataaattgagccctttactctggcgtaaggttcgtaag
ggtttaagcgccggccgggtccagtcagttgccgttcgccttatttgtgatagagaaaaa
gaaattcagaactttgtcccggaagaatactggacaataacagcaaaactaaaagaaaaa
tccagcagcaaaccgtttgacgctgaacttgtatccattgacgggcaaaaaatttcaata
caggatgaaacgcaagcttccgcagcggtgacggaattaagccaggcagaatattcagtt
gccgatgtcaaaaaacgtgagcgaaaacgtaatccttacgcgccatttattactagcagc
cttcagcaagaagcggcgcgccggattggctttacttcccgcaaaaccatgacagtagcc
caacaactgtatgaagggctggatatcggcagttccgggcatgttggtctcattacctac
atgcgaacagattcaactcgggtgtcggaattggcgcagcaggatgcccgtcaatatatc
gccggtaagcatggaacaagttatttgcctgagaagccgccggtttacgccaataaaagg
tcacaggatgcgcatgaagccattaggccaactagtgttgaacttccgccggaggcattg
atatcgcatcttaccaaagatcagttgaagttgtacaccctaatttgggagcggtttatc
gccagccaaatgacggcagccgtctacgatactatgaccattgaaataatggctggccgg
tacaaatttcgggcaaccggctcgcaactaaaattccccggatttttggcggcattttcc
catacgggcaagggcggtgccggcagcggggaaacaaacgaagacagcagcatatccgag
ttggataaagataatctgttgccggaattaactgtcgggcaaaaattaaagctggctaaa
ttattgcctgctcaacactttactgaacccccgccgcgctatacggaagcctctttagta
aaaattttggaggaaaaaggcattggccggccaagcacctatgcaccgacaatagagacc
attgttactcgcggttacgtaagacgggttgaaaaaaaatttgaacccacagaacttggt
tttgtggttgttgatttactaaaagactattttaaaaaaatagtcgacgtggagtttacc
gccggtatggaagaccagttagatgatattgccgatggagatatatcctggctggaagta
ctgcgacagttttacgaaccgtttaacaaagatttagtccacgccgaagaagctattgga
catgttgagcttccggtacaagtgtcggacgtgaaatgcgaaaattgtggcagaatgatg
gtaattaagcaggggcggtatggagatttccttgcctgtcctggttttccggaatgccgg
aatacaaagcccttagtaaaggaaaccggagcaaaatgtcctaaatgtcaaggcgctgta
gttgagcgcaggactaaacgggggaaaacattctatgggtgtgaaaattatcccgcatgc
gactttactacctgggacactccgctggcggaaaaatgtccgcaatgcggttccttcatg
gtacgtcatagattcaaaaatggtggagttacatcccgctgttccaatgccgcttgtcca
gggaatcaggcggccatgaggaatgacgaagaaaagtcaacaaaggtcaagcgggggaaa
aagagtgtctaa
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integrated database retrieval system
