Massilia antarctica: IV454_00985
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Entry
IV454_00985 CDS
T08186
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manc03009
]
IV454_00985
Enzymes [BR:
manc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
IV454_00985
Ribosome biogenesis [BR:
manc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IV454_00985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QPI50249
LinkDB
All DBs
Position
complement(216268..216984)
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AA seq
238 aa
AA seq
DB search
MSKLSLDRILQSQGFGTRKYCRALIEDGEVVINGAPYTDYKTAIDTDGLVMTIFDDEWVY
REHVYIALHKPVNVECSRKPSHHPGVLTLLPEQFTWRDVQPVGRLDHDTTGMLLMSDDGP
FIHTQSSPKRHIPKIYQATTQDPVTPELIAQLLSGVKLHDEPAPLAALSCVQRGEHQLEI
VLEQGKYHQVKRMLAAAGNHCGALHRSAIGQLTLESLGLAEGEWCYLDQAKLDLLVPA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattatccctggaccgcatcctgcaatcgcagggtttcggcacacgcaaatat
tgccgcgccctgattgaagacggcgaagtcgtcatcaatggcgccccctacaccgactac
aagaccgccatcgacaccgatgggctggtcatgacgatcttcgacgatgaatgggtgtac
cgcgaacatgtgtatatcgcgctgcacaaaccggtcaatgtcgagtgttcgcgcaagccg
agccatcatcccggcgtgctgaccttgctgccggaacaattcacttggcgcgacgtgcag
ccggtcggccggctcgaccacgacaccaccggcatgctgctgatgtcggacgacggcccg
tttatccacacccaatcgtcgccgaagcgacacatccccaagatatatcaggccaccacc
caagaccccgtgacgcctgaactgattgcgcaacttctgtccggcgtcaaactgcatgac
gagccggcgccgctggcggcgctcagctgtgtccagcgcggcgagcaccagctcgaaatc
gtgctggaacaaggcaaataccatcaggtcaaacgcatgctcgccgctgccggcaaccat
tgcggcgccctgcaccggtccgccatcggccagctgaccctggaatccttgggcctggcc
gaaggcgagtggtgctatctggaccaggcgaagctggacttgctggtgccggcttga
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