KEGG   Massilia antarctica: IV454_01810
Entry
IV454_01810       CDS       T08186                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
manc  Massilia antarctica
Pathway
manc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:manc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IV454_01810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:manc02022]
    IV454_01810
Two-component system [BR:manc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   IV454_01810
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA HTH_50 AAA_16 TadZ_N FleQ AAA_3 HTH_30 Zeta_toxin bpMoxR TIP49 HTH_23 AAA_7
Other DBs
NCBI-ProteinID: QPI53035
LinkDB
Position
388950..390272
AA seq 440 aa
MQAILVEDEAPLRLATTQTLELGGFTVRAFASAEEAGAALDAAFDGVIVSDIRLPGRSGL
DLLAQVVALDAELPMIMVTGHGDVAMAVGAMRVGAYDFIEKPFGAERLLDAVRRAQERRS
LVLENRRLKTAWALHPDTPQLVGHSDAIERLKVLVRNIAPAGVDILINGQTGTGKEVVAR
LIHAASARKGNFVAINCGALPESVFESEMFGHEAGAFTGAHKRRIGKLEYANGGTLFLDE
IESMPVALQVKLLRVLQERRLERLGGNEAIAVNFRIIAASKADLLELSAQGRFREDLYYR
IGVATIDLPRLNERRDDIAPLMAHFTQDAAQRYGRPVPQWSSQQMSQWQAAEWPGNVREL
RNFAERLVLGIVAAPAPDAAPAPGTALSLPQQLDAYERDLIANALDAVDGNVSTAADQLG
VPRKTLYDKLKKYQLAPGKK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgcaagccatcctggtggaagacgaagcgccgctgcgcctggccaccacccagaccctg
gaactgggcggttttaccgtgcgcgccttcgccagcgccgaagaagccggggcggcgctg
gacgcggcatttgatggcgtgatcgtcagcgatatccgcctgcccgggcgctcgggcctg
gacctgctggcgcaagtggtggcgctcgatgcggaactgcccatgatcatggtgaccggc
catggcgacgtggcgatggcggtcggcgccatgcgcgtcggcgcgtacgacttcatcgaa
aagccgttcggcgccgaacgcctgctcgacgcggtgcggcgcgcccaggagcggcgcagc
ctggtgctggaaaaccgccgcctcaagacggcgtgggcgctgcatcccgatacgccgcag
ctggtggggcactcggacgccatcgaacggctcaaggtcctggtgcgcaatatcgcgccg
gccggcgtggacatcctgatcaacggccagaccggcaccggcaaggaagtcgtcgcgcgc
ctgatccacgcggccagtgcgcgcaagggcaattttgtcgcgatcaattgcggcgccctg
cccgaatcggtattcgagagcgagatgttcgggcacgaggccggtgcgtttacgggcgcg
cacaaacgccgcatcggcaagctggaatacgccaacggcggcaccctgtttctcgacgag
atcgagagcatgccggtggcgcttcaggtcaagctgctgcgggtgctgcaggagcgccgg
ctggagcgcctgggcggcaacgaggcgattgcggtgaattttcgcatcatcgcggccagc
aaggccgatctgctggaactgagcgcgcagggccgctttcgcgaagacctgtactaccgg
atcggcgtggcaacgatcgacctgccgcgcctgaacgaacggcgcgacgacatcgcgccg
ctgatggcgcacttcacacaggatgcggcgcagcgctacgggcggccggtgccgcagtgg
agcagccagcaaatgagccagtggcaggcggcggaatggccgggcaatgtgcgcgaactg
cgcaacttcgctgagcggctggtgctcggcatcgttgcggcgccggcgccagacgccgct
cccgctccgggcaccgccttgagcctgccgcagcagctcgacgcctatgagcgcgacctg
atcgccaacgcgctcgacgccgtggacgggaatgtgtcgaccgccgccgaccaactcggc
gtgccgcgtaaaaccctgtacgacaagctcaaaaaataccagctggcacctggcaaaaaa
tag

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