Massilia antarctica: IV454_02150
Help
Entry
IV454_02150 CDS
T08186
Name
(GenBank) alginate lyase family protein
Organism
manc
Massilia antarctica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
F5_F8_type_C
DUF1349
Sad1_UNC
Motif
Other DBs
NCBI-ProteinID:
QPI50448
LinkDB
All DBs
Position
483753..486254
Genome browser
AA seq
833 aa
AA seq
DB search
MPPATTGGIPAVPVTPEASPAVPVTTGGSALPPVITPPPSGIPATTGGIPVARSFTHPGA
PLTLLDLKTLKGYVDQGRQPWKSGYDQLASSPMSRLSYGGYGPFAKVSRAPDENLHAWRT
DMVAIWNLSRMWYFTRDERYAENARKFLLRWATTHTEFSGRESMLDLGDYAMQFVGGAEI
LRGTWPGWKEADTAIVKKYFKDVLMPAANPWGESSYGAANKGALALTAQGLMAIYNDDTE
TLDRVVYQTRTLAHVGLRNSNDIGMLGDYLRDQGHAYGQLKSLTMLAEALWSQGIDIYSD
FDNRLLAAGEYFARVNELVPTTALPFGTTDAYYTSDVTEHGWQGANGGATALTQIYGAYV
LRKGLQAPFIAQRRLWVGVSGDSFMFLKDSDTSKAAAPAALPIPSTTSITTGFSSANIGG
ASPAGVATYANGKWTVQGAGNDIFWGTQDGCHFAYKAITGNSAIIAKVESVQNTNPAAVA
GVMMRTSLERGAPRAWMAIDNSGKAKQNMQKLAVYGGSNYGTKAMGIASSTPSYWVKLER
IGNIITGYVSPDGTNWAATDVGRIDGPVPDTIYVGLVVTSVSGALNSSTFSNVQITGGDG
GAASVIPAAPAMLLASPGDGAVPLRWQASFGATSYTVKRSTFSGGPPSTIASGIRGTSYT
DKSATKGTTYYYTVTATNSAGTSANSPEDSATPVPQVVTVVSGGTANDSAGNATNARRAF
DQNPWSQWLYAGTSGWLQYDLGHAERVLRYSVISTLDANLIGRDPRNWQFQGSNNGSTWT
TIDTRSNQKRSELKMYSVASPGSYRYYRLNITANNGDSSFTALSEFGLFALKP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
gtgccccccgctaccacagggggcatcccggcggtcccggttaccccggaagcctccccg
gcggtcccagtgaccacagggggtagcgcgctgcccccagttatcacgccgccgccctcc
gggatccccgcgaccacagggggtatcccggtggcccgcagtttcacgcatccaggcgcc
ccgcttaccctcttggatctcaagactctcaaggggtacgtcgatcaaggcaggcagcct
tggaagtccggctacgaccaactggcgagtagtcccatgtccaggctcagctacggaggg
tatggcccgttcgcgaaagtgagccgcgcccctgacgagaacctgcacgcctggcgcacc
gacatggtcgcgatctggaatctctcgcgcatgtggtacttcaccagggacgagcgatac
gcggagaatgcgcgcaagtttctgcttaggtgggccaccacccataccgagttctcgggt
cgcgagtcgatgctcgatctgggcgactacgccatgcagttcgtgggcggcgcggaaatc
ctgcgcggcacatggcccggctggaaggaggccgacacggcgatcgtcaagaagtacttc
aaggacgtcctgatgccggcagcgaacccctggggcgaaagctcgtacggggctgccaac
aagggcgcactggccctcaccgcccaggggctgatggcgatctacaacgacgataccgag
acattggacagggtcgtttatcagacccgcacgctggcccatgtcggactgcgaaattcc
aatgacatcggcatgcttggcgactacctccgcgatcaggggcatgcctatgggcagctc
aagtcactgaccatgctcgccgaagcgctctggagccaaggcattgacatctattccgac
tttgacaaccgcctgctggcggcgggtgaatatttcgcgagggtgaacgagcttgtgccc
acgacagcgcttcctttcggcaccaccgatgcctattacacctccgacgttaccgagcac
ggctggcagggcgccaatggcggagccacggcgctgactcaaatttatggggcctacgtc
ctgcgcaagggtctccaggcacccttcatcgcccagcgacgtctctgggtgggggtgagc
ggcgacagtttcatgttcctcaaggattccgacacctcgaaggcggcggcgccggcggcg
ctgcccattccttcgaccacctcgatcaccactgggttcagcagtgcgaacatcgggggc
gcctccccggcgggcgtggctacctacgccaacggcaaatggacggttcagggagcgggt
aacgacatattctggggcacgcaagacggttgccacttcgcctataaggccatcaccggc
aacagcgccatcatcgcgaaagtcgagtccgtccagaacaccaatcctgccgcagtggcc
ggcgtgatgatgcgaacaagcctggaacgaggcgctccccgcgcctggatggccatcgac
aacagtggcaaggccaaacagaacatgcagaaactcgcggtgtatggtggctcgaactac
ggaaccaaagccatgggcatcgccagttccacgccctcgtactgggtgaagctcgaacgc
atcgggaacatcatcaccggctacgtttctcccgatggcaccaattgggcagccaccgat
gtcgggcgcatcgacggccccgttcccgacacgatctatgttggcctggtggtcacctca
gtcagtggtgccctgaacagctccaccttcagcaacgtgcagatcaccggcggcgacggt
ggtgcggcgagcgtcattccggcagcgcccgccatgctgctggcctcaccgggcgatggc
gccgtgccgctgcgctggcaggcgtccttcggcgccaccagctacaccgtcaagcgctcc
accttcagcggcggcccaccttcaaccattgcatcgggcatcaggggcaccagctacacg
gacaagtccgcgaccaagggcacaacctactactacaccgtcacggcgaccaactccgcc
ggcacgagcgctaactctcccgaggacagcgccacaccggttccacaagtggtgaccgtc
gtcagcggtggcaccgccaacgacagtgcaggcaacgcgaccaacgccagacgcgctttc
gaccagaacccctggtcgcaatggctctacgccggcacaagcggctggctgcagtatgac
ctcggccacgccgagcgcgtcctgcgctattcggtcatcagcaccttggacgccaacctc
ataggacgcgatccgaggaactggcagttccaaggctccaacaacggctccacctggacc
acgatcgacacgcgaagtaaccagaaacgctccgagttgaagatgtactcggtcgcgagt
ccgggctcgtatcgctattaccggctgaacatcacagccaataacggcgacagcagcttc
acggcgctttccgaattcgggctgttcgctttaaagccatag
DBGET
integrated database retrieval system
