Massilia antarctica: IV454_03040
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Entry
IV454_03040 CDS
T08186
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
manc
Massilia antarctica
Pathway
manc00521
Streptomycin biosynthesis
manc00523
Polyketide sugar unit biosynthesis
manc00541
Biosynthesis of various nucleotide sugars
manc01100
Metabolic pathways
manc01110
Biosynthesis of secondary metabolites
manc01250
Biosynthesis of nucleotide sugars
Module
manc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IV454_03040 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IV454_03040 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IV454_03040 (rfbC)
Enzymes [BR:
manc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IV454_03040 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QPI50604
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All DBs
Position
complement(689431..689976)
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AA seq
181 aa
AA seq
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MKATPTAMPEVLILEPRVFGDDRGFFFESFNERKFEQLTGVAAHFVQDNHSKSAKNVLRG
LHYQISQPQGKLVRVSAGAVYDVVVDLRKSSAFFGRWIGVDLSAENQRQLWIPPGFAHGF
MVTSESAEVQYKTTDYWAPELERVILWNDPDIGIDWPLRGLPMLSSKDSKGTPLAQSDVF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccacgccaaccgccatgcccgaagtgctgatcctggaaccgcgcgtgttcggc
gacgaccggggttttttcttcgagagtttcaacgaacgcaagttcgagcagctgaccggt
gtcgccgcccattttgtccaggataaccattccaaatcggccaaaaatgtcttgcgcggc
ctgcattatcagatcagccagccgcaaggcaaactggtgcgcgtcagcgccggcgccgtg
tatgacgtggtggttgatctgcgcaaatcatcggcctttttcgggcgctggatcggggtc
gatttatcggccgaaaaccagcgtcagctgtggattccgcccggcttcgcacatggtttc
atggttaccagcgagagcgctgaagtccagtacaaaaccaccgattactgggcgcccgag
ctggaacgggtgattttgtggaacgatcccgatatcggcatcgactggcccctgcgcggg
ctgcccatgctctccagcaaggatagcaaggggacgccgctggcgcagtccgacgtgttt
ccgtga
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