Massilia antarctica: IV454_03310
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Entry
IV454_03310 CDS
T08186
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
manc
Massilia antarctica
Pathway
manc02024
Quorum sensing
manc03060
Protein export
manc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IV454_03310 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IV454_03310 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IV454_03310 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
manc02044
]
IV454_03310 (ffh)
Enzymes [BR:
manc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IV454_03310 (ffh)
Secretion system [BR:
manc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IV454_03310 (ffh)
Eukaryotic Sec-SRP protein
IV454_03310 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
AAA_16
AAA_30
T2SSE
nSTAND3
AAA_14
YqeC
ATP_bind_1
AAA_33
AAA
cobW
KTI12
ParA
ArsA_ATPase
GTP_EFTU
Rad17
NTPase_1
Thymidylate_kin
ResIII
Helicase_RecD
AAA_19
APS_kinase
AAA_24
NACHT
6PF2K
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QPI50645
LinkDB
All DBs
Position
752537..753907
Genome browser
AA seq
456 aa
AA seq
DB search
MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFISRVKEKAL
GEEVMASLSPGQALVGVVQRELGALMGADLGPEASQLSFAQQPPAIILMAGLQGVGKTTT
VGKLAKYLKEEKKKKVLTVSADVYRPAAIAQLESVTKQVGADFFPSAATDKPVDIALAAL
DWARKHYHDVLIIDTAGRLGIDEAMMQEISAVHAAVNPIETLFVVDAMLGQDAINTAKAF
NDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVSEKLDGLEAFDAQRMANRILG
MGDILALVEEARKGVDSKAAADLANKIKVGGRFDMNDFKSQLGQMKKMGGMSSLIDKLPA
QFQQAAGGANMDQADKQVRRMVGIIDSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR
MLAQYDQMQAMMKKFKGGGMMKMMRSMKGMMPGGMR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgctagataacttaacccaacgccttgccaaggtcgtcaagaccatgcgcggtgaggcg
cgtctgaccgaatcgaataccgccgagatgctgcgcgaagtgcgcctggccctgctcgaa
gccgacgtggccctgcccgccgtgcgcgagttcatcagccgcgtcaaggaaaaagccctc
ggcgaagaagtcatggcctcgctcagcccgggccaggccctggtcggcgtggtccagcgc
gagctgggcgcgctgatgggcgccgacctcggtccggaagcgtcgcagctgagctttgcc
cagcagccgccggcgatcatcctgatggccggcctgcagggtgtgggcaagaccaccacc
gtcggcaagctggccaagtacctcaaggaagagaaaaagaagaaggtcctgaccgtctcg
gccgacgtctaccgtccggccgcgatcgcccagctcgaatcggtgaccaagcaggtcggc
gccgacttcttcccgtccgccgccaccgacaagccggtcgacatcgccctggccgcgctg
gactgggcgcgcaagcactaccacgacgtgctgatcatcgataccgccggacgcctcggc
atcgacgaagcgatgatgcaggaaatctccgccgtgcacgcggcggtcaacccgatcgaa
accctgttcgtggtcgacgccatgctggggcaggatgcgatcaacacggccaaggccttc
aacgacgcgctgccgctgaccggcatcgtgctcaccaagctcgatggcgactcgcgcggc
ggcgcggcgctgtcggtgcgccacatcacgggtaagccgatcaagtttgccggcgtgtcc
gaaaaactcgacggcctggaagccttcgacgcccagcgcatggccaaccgtattttgggc
atgggcgacatcctggcgctggtggaagaagcgcgcaagggcgtcgacagcaaggccgcg
gccgacctggccaacaagatcaaggtgggcggccgcttcgacatgaacgacttcaagtcg
cagctggggcaaatgaaaaagatgggcggcatgtcgagcctgatcgacaagctgccggcg
caattccagcaggcggccggcggcgccaacatggaccaggccgacaagcaggtgcggcgc
atggtcggcatcatcgattcgatgacgccgcaggaacgcgccaagccggaactgatcaag
gccacgcgcaagcgccgcatcgccgccggcgccggcgtgcaggtgcaggaagtgaaccgc
atgctggcccagtacgaccagatgcaagccatgatgaagaaattcaaagggggcggcatg
atgaaaatgatgcgctcgatgaagggcatgatgccgggcgggatgcggtag
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