Massilia antarctica: IV454_05065
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Entry
IV454_05065 CDS
T08186
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
manc
Massilia antarctica
Pathway
manc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IV454_05065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manc03019
]
IV454_05065 (recQ)
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_05065 (recQ)
Enzymes [BR:
manc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IV454_05065 (recQ)
Messenger RNA biogenesis [BR:
manc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IV454_05065 (recQ)
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IV454_05065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QPI50934
LinkDB
All DBs
Position
1124892..1126715
Genome browser
AA seq
607 aa
AA seq
DB search
MDSDLSARALDQLQTVFGYPAFRGQQKEIVEHVASGGDALVLMPTGGGKSLCYQIPALLR
DGVGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQTYEESMRIERLVRTGEIDLVYVAPE
RLMTQRCLDLFQASKIALFAIDEAHCVSQWGHDFRPEYIKLSILHEQFPDVPRIALTATA
DQQTRAEIALRLQLDDARQFVSSFDRPNIRYQIVEKGNGRKQLLDFITTEHGSDAGIVYC
LSRKKVEETADFLNENGIRALPYHAGMDYPKRSANQARFLREESIVMVATIAFGMGIDKP
DVRFVCHLDLPKSIEGYYQETGRAGRDGMPASAWMAYGLQDVVLQRRMIDESEADETFKR
VLSMKLDAMLGLCETLSCRRVRLLEYFGEQSTPCGNCDTCLIPPVSFDGTVPVQKLLSAI
YRVDQRFAAGHVIDVLRGVETDRIKQWHHDSLSVYGIGSERTEAEWRAILRQAIALGLIT
VDHEVYSSLKLTDAARPVLKGGQKVQLRQYQKPVKQKRAPSASSKGHVEMDLSKSEQAIF
EKLRWWRVETARAHNVPAYVIFVDATLREIAKAKPTSLQELRGVTGVGEKKLVSYGDEIV
AIIMEMS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacctctcagcgcgcgcgctcgaccagctgcagacggtcttcggctacccg
gcctttcgcgggcagcagaaagagatcgtcgaacacgtcgccagcggcggcgatgcgctg
gtgctcatgccgaccggcggcggcaagtcgctgtgctaccagattcccgcgctgctgcgc
gacggcgtcggcgtggtcgtgtcgcccctgatcgcgctgatgcaggaccaggtcgacgcg
ctggccgaagtcggcgtgcgcgccgcgtttttgaattcgacccagacctacgaagaatcg
atgcgcatcgaacgcctggtgcgcaccggcgagatcgacctggtgtacgtggcgccggag
cgcctgatgacgcagcgctgcctggacctgttccaggcgtcgaagatcgcgctgttcgcc
atcgacgaggcgcactgcgtgtcgcaatgggggcatgacttccgccccgagtacatcaag
ctgtcgatcctgcacgagcaattcccggacgtgccgcgcattgcgctcaccgccaccgcc
gaccagcagacgcgcgccgaaatcgcgctgcgcctgcaactggatgatgcgcgccagttc
gtgtcctcgttcgaccgccccaacatccgctaccagatcgtcgaaaaaggcaacgggcgc
aagcagctgctcgacttcatcaccaccgagcatggcagcgatgccggcatcgtgtactgc
ctgtcgcgcaagaaggtcgaggaaaccgccgacttcctgaacgaaaacggcatccgcgcc
ctgccctaccacgccggcatggactaccccaagcgcagcgccaaccaggcccgcttcctg
cgcgaggaaagcatcgtgatggtcgccaccatcgcctttggcatgggcatcgacaagccg
gacgtgcgcttcgtgtgccacctggatctgccgaaaagcatcgagggctactaccaggag
accggacgcgcgggccgcgacggcatgccggccagcgcctggatggcctacggcttgcag
gacgtggtgctgcagcggcgcatgatcgacgagtcggaagccgacgaaaccttcaagcgg
gtgctgtcgatgaaactcgacgccatgctgggcctgtgcgagacgctcagctgccgcagg
gtgcgcctgctcgaatacttcggcgaacagtccaccccctgcggcaattgcgatacctgc
ctgattccgccggtctccttcgacggcacggtgccggtgcaaaaactgctgtcggcgatt
taccgggtcgaccagcgcttcgcggccggccacgtgatcgacgtgctgcgcggggtcgag
acggaccgcatcaaacagtggcaccatgattcgctgtcggtatacggcatcggcagcgaa
cgcaccgaagccgagtggcgcgccatcttgcgccaggccatcgcgctcggcctgatcacg
gtcgaccatgaagtttacagttcgctcaagctgaccgacgccgcgcgtccggtactcaag
ggcggccagaaggtgcagctgcgccagtaccagaagccggtcaagcagaagcgcgcgccg
tccgcctcgtccaaggggcatgtggagatggacctgtccaaatccgaacaggcgattttc
gagaagctgcgctggtggcgggtcgaaaccgcgcgcgcgcacaacgtgccggcctatgtg
atctttgtcgacgccaccctgcgcgaaatcgccaaggccaagcccacctccttgcaggaa
ctgcgcggcgtgaccggcgtgggcgagaagaagctggtctcgtatggcgacgagattgtc
gccatcatcatggagatgagctaa
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