Massilia antarctica: IV454_08450
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Entry
IV454_08450 CDS
T08186
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
manc
Massilia antarctica
Pathway
manc00061
Fatty acid biosynthesis
manc00071
Fatty acid degradation
manc01100
Metabolic pathways
manc01212
Fatty acid metabolism
manc02024
Quorum sensing
manc04146
Peroxisome
Module
manc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IV454_08450
00071 Fatty acid degradation
IV454_08450
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IV454_08450
09145 Cellular community - prokaryotes
02024 Quorum sensing
IV454_08450
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
manc01004
]
IV454_08450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manc04147
]
IV454_08450
Enzymes [BR:
manc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IV454_08450
Lipid biosynthesis proteins [BR:
manc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IV454_08450
Exosome [BR:
manc04147
]
Exosomal proteins
Exosomal proteins of breast milk
IV454_08450
Exosomal proteins of breast cancer cells
IV454_08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPI53164
LinkDB
All DBs
Position
complement(1858745..1860676)
Genome browser
AA seq
643 aa
AA seq
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MQTFPRRLLAHAQTRPQRPAFREKHLGIWQTWNWLEVNAEVRALACGLASLGFTRGMNLA
IIGDNRPRLYWAMLAAQCLGGVPVPLYQDAPAADMAYVLNDAGIGFAIVEDQEQVDKLLE
LQALCPQVRHIVFDDERGMRHYKQAALTSLTALQALGRAWDQAHPGAFEAAVAAGSGSDI
AIILYTSGTTGKPKGVCQSHAALLAAGVGGVGFDKLTDREDILSYLPMAWVGDCLFSLAQ
AMVAGFTVNCPESGDTVLTDLREIGPTYYFAPPRVFENMLTTVMIRMEDAGSIKRRMFHH
FMDVAKRCGADILDGKPVPAFDRAAYALGHLLVYGPLKNVLGLSRVRVAYTAGAAIGPDL
FRFYRSIGVNLKQLYGSTETCAYVCLQPDGNIKFDSVGLPAPGVEVRIAASGEVLVKSAA
TMAGYFKRDDATAEVIDADGYFHTGDAGMFDSEGHLKIIDRAADVGKMTCGAIFAPNYIE
NKLKFFPFIKEAVAFGDTRSQVCAFINIDMEAVGNWAERRNIAYAGYTDLAAHCTTYDLI
RDCVEKVNADLAGEALMGATQIHRFLILHKELDPDDDELTRTRKVRRKFIADKYAVLIDA
LYTDKASQFISTQVKFEDGRVGLVSADLRICGATTYPVMEKAA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
ttgcagactttcccgcggcggctgctggcgcacgcccagactcgcccgcagcgccccgcc
ttccgcgaaaagcacctgggcatctggcagacctggaattggctggaggtgaatgccgag
gtgcgcgccctggcctgcggcctggcctcgctcggtttcacgcgcgggatgaacctggcc
atcatcggcgacaaccgcccgcgcctgtactgggccatgctcgccgcgcagtgcctgggc
ggggtgccggtaccgctctaccaggacgcaccggcggccgacatggcctacgtattgaac
gacgccgggatcggctttgccatcgtcgaagaccaggagcaggtcgacaagctgctcgaa
ctgcaagcactgtgcccgcaggtgcgccacatcgtcttcgacgacgaacgcggcatgcgc
cactataagcaggccgccctgacctcgttgacggccttgcaggcactgggccgcgcatgg
gaccaggcgcaccccggagcgttcgaggcggcggttgccgccggcagcggcagcgatatt
gcgatcatcctgtacacctccggcaccaccggcaaaccgaagggcgtatgccagtcgcat
gccgcgctgttggcggccggcgtgggcggggttggcttcgacaagctgaccgaccgcgaa
gacatcctgtcctacctgcccatggcgtgggtgggcgactgcctgttctcgctggcgcag
gcgatggtggccggcttcacggtcaactgcccggagtcgggcgacacggtgctgaccgat
ctgcgcgaaatcggcccgacctattactttgcgccgccacgcgtgttcgagaacatgctc
accaccgtgatgatccggatggaagacgcgggctcgatcaagcgcaggatgttccaccac
ttcatggacgtggccaaacgctgcggcgccgatatcctggacggcaagccggtgccggcg
ttcgaccgcgcggcgtatgcgctcggccacctgctggtctatggcccgctgaaaaacgtg
ctcggactgtcgcgcgtgcgcgtggcctacaccgccggcgcggcgatcgggccggacctg
ttccgcttctaccgctcgatcggggtcaatctgaagcagctgtacggctccaccgaaacc
tgcgcctacgtgtgcctgcaaccggacgggaacatcaagttcgacagcgtcggcctgccg
gcgcccggcgtcgaggtaaggattgccgccagcggcgaggtgctggtcaagtcggcagcg
accatggcgggctacttcaagcgcgacgatgcgaccgccgaggtgatcgacgccgacggc
tacttccacacgggcgacgccggcatgttcgatagcgaaggccacctgaagatcatcgac
cgcgcggccgatgtgggcaagatgacctgcggcgcgatcttcgcgcccaactacatcgag
aacaaactgaagtttttcccgtttatcaaggaagcggtcgcctttggcgatacgcgcagc
caggtgtgcgccttcatcaatatcgacatggaagcggtcggcaactgggccgagcggcgc
aacatcgcctacgccggctacaccgacctggccgcgcactgcaccacctacgacctgata
cgcgactgcgtggaaaaggtcaatgccgacctggccggcgaagcgctgatgggcgcgacc
cagatccaccgcttcctgatcctgcacaaggagctcgatccggacgacgatgagttgacg
cgcacgcgcaaagtgcggcgcaaattcatcgccgacaaatacgcggtgctgatcgacgcg
ctgtacaccgacaaagccagtcagttcatcagtacccaggtcaagtttgaagatggccgg
gtgggattggtcagcgccgatttgcgcatctgcggggctaccacctatcccgtcatggag
aaggctgcgtga
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