Massilia antarctica: IV454_09120
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Entry
IV454_09120 CDS
T08186
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manc03000
]
IV454_09120
Transcription factors [BR:
manc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IV454_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_41
HTH_22
HTH_36
DUF134
LacI
Motif
Other DBs
NCBI-ProteinID:
QPI51637
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Position
complement(1999428..2000051)
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AA seq
207 aa
AA seq
DB search
MNLPQRLTDRKRLAILAAAAEQFRSCGFEASSMDKIAADAGVSKRTVYNHFPSKDELFAE
TLVQLFERSAAELDLPYRGDTSLRAQLTELMTIKVRAMADQDFLDLARVAIAEGMHAPER
ARAIVARLGEREEGVTRWIRAALADGKLKDCDPVFAATLLQGQVKAMAFWPQVTMGAPPL
APELHAAVVDAAVSMFLSYFAQAKHAA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacctcaacgcctgactgaccgaaaacgccttgccatccttgccgccgccgcc
gagcaatttcgcagttgcggcttcgaagcgagcagcatggacaagatcgccgccgatgcc
ggcgtgtcgaaacgcacggtttacaaccactttcccagcaaggatgagttattcgccgaa
accctggtgcagttgttcgagcgcagcgcggccgagctggacttgccttatcgcggcgac
accagcctgcgtgcgcagttgaccgaactgatgaccatcaaagtgcgggcgatggccgac
caggactttctcgacctggcgcgcgtcgccatcgccgagggcatgcacgcaccggagcgg
gcgcgcgccatcgtggcgcgcctgggcgagcgcgaggaaggggtgacgcgctggatccgc
gcagccctggccgacggcaagctcaaggactgcgacccggtctttgccgcgaccctgcta
caggggcaggtcaaggcgatggcgttctggccgcaggtgaccatgggcgcgccgccgctg
gcgccggaactgcacgccgccgtggtcgacgccgccgtcagcatgttcctgagctacttc
gctcaggcaaaacacgccgcgtag
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