Massilia antarctica: IV454_10550
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Entry
IV454_10550 CDS
T08186
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
manc
Massilia antarctica
Pathway
manc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IV454_10550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manc02000
]
IV454_10550
Transporters [BR:
manc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IV454_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QPI51892
LinkDB
All DBs
Position
2321663..2324755
Genome browser
AA seq
1030 aa
AA seq
DB search
MSLSELCIRRPVMVVLLSLSLILVGVLSYMAIPVAALPSYNTPVINVQANLSGASPETMA
SSVALPLEKQFSTIAGINLITSTSTQGQTSLTLEFDPSIDVNVAAIDVQAALLGAQRQLP
QEMTELPSYRKVNPADAPVLFMAMTSPSMNLSELNDYAENLVAPSLSTLPGVAQVSVNGQ
KRFAVRVRAKADLMNARNLSMDELALALRAANSNAPLGVLDGPSQTMTIQGNAQLMNAAA
FSELIVATRNGEPVRLKDVAAVEDSYQSVKAAGSYNGERSIVLLVQRQPNANTVQVVDAV
RKLLPRFEAQLPASIKISLVNDRSVSIREAIHDVNLTLAGTVALVVLVIFLFLHRAAATF
IPAVTMPISLLGALSLLYAFGYSLDNVSLLGITLAVGLVVDDAIVVLENIVRHIEMGKKP
VEAALVGSREMGFTIVSISISLVAVFIPIFFMPGVIGLLFHEFAVVVGLSVLVSALVSLT
LVPMLASRLLPAHALDGGGEKSFIGRHFEAGFARVRDAYARSLDFALGHRFIVLLVALGT
FVLTIILYTTIPKGFFPEEDLGQLRMSIEAAEDTSTDAMLLLQEKVVAIIRADPSVQDVT
SFTSGGNTGRGFIALKPRDQRVKMPQVVDSLRKATRQVAGVAVFLSPIQNLQLGGRPSKS
RYQYTLQSVSSDALGDWAGKYLERMRADPDFRDVTSDSQNRGLQATLKIDRDKANAMGVQ
IADVRTALYAAFGERQVSTIYSAAASYNVILEAELADRQSEDALGRVSVRSKGGQLVRLS
SFATVERTVGPTAVNHQGQLQAITLSFNLGAGVPLGVATGKIDRMGVDMKLPASVITKYG
GDAAVFQDSQSSQIILIVAALGVIYVLLGVLYESFIHPLTILAGLPSAAVGALLTLRIFG
LDLTMIAIIGILMLIGIVKKNAIMMIDFALHAQRNEGLSPAAAIREACILRLRPILMTTM
AALMGALPIALGVGAGAELRQPLGLAVVGGLLFSQVITLYVTPVIYLFLDKYSGSGPMTD
AQLATLETVH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtccgaactgtgtatccggcgccccgtcatggtggtgctgctctcgctcagc
ctgatcctggtgggcgtgctctcgtacatggccattccggttgccgcgctgcccagctat
aacaccccggtcatcaatgtccaggccaacctgtccggagccagcccggaaaccatggcg
tcctcggtcgcgctgccgctcgaaaaacagttttcgaccatcgccggcatcaacctcatc
acctcgaccagtacccagggccagacctcgctgaccctggaattcgatcccagcatcgat
gtcaacgtggccgccatcgatgtccaggccgcgctgctcggcgcccagcgccagctgccg
caggaaatgacggagttgccttcctaccgcaaggtcaacccggccgatgcgccggtgctg
ttcatggccatgacctcgccctcgatgaatctgtcggagctgaacgattacgccgaaaac
ctggtcgcccccagcctgtcgaccctgcccggcgtggcccaggtatcggtcaacggccag
aaacgcttcgcggtgcgggtgcgcgccaaggccgacctgatgaacgcgcgcaacctgtcg
atggacgagctggcgctggccttgcgcgccgctaactcgaacgcgccgctcggcgtgctc
gacggtccgagccagaccatgaccatccagggcaatgcccagctgatgaacgcggccgcg
ttttccgaactgatcgtggccacccgcaacggcgagccggtgcgcctgaaagacgtggct
gcggtcgaggacagctaccagtcggtgaaggcggccggcagctacaacggcgagcgctcg
atcgtgctgctggtgcagcgccaacccaacgccaacacggtgcaggtggtcgacgcggtg
cgcaagctcttgccgcgcttcgaagcgcagctgcccgcctcgatcaagatcagcctcgtc
aacgaccgttcggtctcgatccgcgaagccatccacgacgtcaacctgaccctggccggc
accgtggcgctggtggtgctggtgatcttcctgttcctgcaccgcgccgccgccaccttc
attccggccgtgacgatgccgatttccctgctgggcgccttgtcgctgctgtatgccttc
ggctacagcctggataatgtgtccctgctcggcatcaccctggccgtgggcctggtggtc
gacgacgccatcgtggtgctggaaaacatcgtacgccacatcgaaatgggcaagaagccg
gtcgaggccgcgctggtcggctcgcgcgaaatgggctttaccatcgtctcgatttcgatc
tcgctggtggccgtgttcatcccgatcttcttcatgccgggcgtgatcggcctgctgttc
catgaattcgcggtggtggtcgggctgtcggtgctggtgtcggcgctggtgtcattgacc
ctggtgccgatgctggccagccgcctgctgccggcccatgcgcttgatgggggcggcgag
aaaagttttatcggacgccacttcgaggccggcttcgcgcgcgtgcgcgacgcttacgcg
cgctcgctcgactttgcgctggggcaccgcttcatcgtgctgctggtggcgctgggcacc
ttcgtgctgacgatcatcctgtacaccaccattcccaagggctttttccccgaggaagac
ctgggccagctgcgcatgagcatcgaagcggccgaggatacctcgaccgacgccatgctg
ctcctgcaagaaaaagtggtagccatcatccgggccgatccgagcgtgcaggatgtgacc
tcgttcaccagcggcggcaacaccgggcgcggcttcattgccctgaaaccgcgcgaccag
cgcgtgaaaatgccgcaggtggtcgacagcttgcgcaaggcgacccgccaggtggccggc
gtggcggtattcctgtcgccgatccagaacctgcagctgggcgggcgccccagcaagagc
cgctaccagtacaccctgcaaagcgtcagttccgatgcgctgggcgactgggccggcaaa
tacctggagcgcatgcgcgccgatccggacttccgcgacgtcaccagcgattcgcagaac
cgcggcctgcaagcgaccctgaaaatcgaccgcgacaaggccaacgccatgggcgtgcag
atcgccgacgtgcgcaccgccctgtacgcggccttcggcgagcgccaggtgtcgaccatt
tattcggccgccgccagctacaacgtgatcctggaagccgaactggccgaccgccagtcc
gaggatgcgctgggacgggtgtcggtgcgcagcaagggcggccagctggtgcgcttgtcg
agcttcgcgacggtcgagcgcaccgtgggtccgaccgcggtcaaccaccagggccagttg
caggccattaccctctcgttcaacctgggcgccggcgtgccgctcggcgtggccaccggc
aagatcgacaggatgggcgtggacatgaagctgccggcctcggtgatcaccaaatatggc
ggcgacgctgccgtgttccaggattcgcagtcgagccagatcatcctgatcgtggccgcg
ctgggcgtcatctatgtgctgctgggcgtgctgtacgaaagcttcattcacccgctgacc
atcctggccggcttgccctcggccgccgtgggtgcgctgctcaccttgcgcatcttcggg
ctggacctgaccatgatcgccatcatcggcatcctgatgctgatcgggatcgtcaagaag
aacgccatcatgatgatcgacttcgccctgcacgcccagcgcaacgagggcttgagcccg
gcagcggcgatccgcgaagcctgcatcctgcgcctgcgcccgatcctgatgaccaccatg
gccgcgctgatgggcgccctgccgatcgcgctgggcgtgggcgccggcgccgaattgcgc
cagccgctcggcctggccgtggtcggcggcctgctattctcgcaagtcatcacgctctac
gtcaccccggtgatctacctgttcctcgacaagtacagcggcagcgggccgatgaccgat
gcccagctggccaccctggaaacggtgcattga
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