KEGG   Massilia antarctica: IV454_10975
Entry
IV454_10975       CDS       T08186                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
manc  Massilia antarctica
Brite
KEGG Orthology (KO) [BR:manc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:manc03019]
    IV454_10975 (rapZ)
Messenger RNA biogenesis [BR:manc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     IV454_10975 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_16 CoaE AAA_22 FtsK_SpoIIIE AAA_29
Other DBs
NCBI-ProteinID: QPI51967
LinkDB
Position
complement(2416520..2417383)
AA seq 287 aa
MRIVLITGISGSGKSVALNVLEDAGYYCVDNLPPALLPSLIDALIADGTACAAVAVDARS
AQSLVELPANIRVLKDQGHDIKVMFLTSNTHSLVARFSETRRSHPLSHQLRPDENPASRR
TLIECILEERERLSAIEQLGHVIDTSDLSANKLRAWIKELVEIERAPLTLFFESFAFKLG
VPLDADFVFDVRALPNPYYDLTLRPLTGMDAPVIAFLDAQPSAAELLEDIRAFVEKWLPS
FKTDNRSYLTVALGCTGGQHRSVYMAERLAAYFSPTERVVLRHREQS
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcgcatcgtactcatcacaggtatttccggatcgggcaaatcggtcgccctcaacgtc
cttgaagatgcaggctactactgcgtcgacaacctcccgccggccttgttaccgagtctg
atcgacgcgctgatcgcggacggcaccgcttgcgccgccgtcgcggtcgatgcgcgcagc
gcccagtcgctggtcgaactacccgccaacatccgcgtgctcaaagaccagggccacgac
atcaaggtcatgttcctgacctcgaacacgcactcgctggtggcgcgcttttccgaaacg
cggcgcagccatccgctgtcgcaccagctgcgtcccgacgaaaatcccgcttcgcgccgc
accctgatcgaatgcatcctcgaagagcgcgagcgcctgtccgccatcgagcagcttggc
cacgtgatcgacacgtccgacctgtcggccaacaagctgcgcgcatggatcaaggaactg
gtcgagatcgagcgtgccccgctcaccctcttcttcgagtcgttcgcgttcaaactgggc
gtgccgctcgacgccgacttcgtgttcgacgtgcgcgccctgcccaatccctactacgac
ctgaccttgcgccccctcaccggcatggatgcgccggtgatcgccttcctcgacgcccag
cccagcgcggccgaactgctggaagacatccgcgccttcgtcgagaagtggctgccgtcg
ttcaagaccgacaaccgcagctacctgaccgtggcgctgggctgcaccggcgggcagcat
cgctcggtgtacatggccgaacgcctcgccgcctacttcagcccgaccgaacgggttgtg
ctgaggcaccgcgagcaatcctga

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