Massilia antarctica: IV454_11720
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Entry
IV454_11720 CDS
T08186
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
manc
Massilia antarctica
Pathway
manc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IV454_11720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_11720
Enzymes [BR:
manc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IV454_11720
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IV454_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Zn_Tnp_IS1595
DpnI
Motif
Other DBs
NCBI-ProteinID:
QPI52102
LinkDB
All DBs
Position
complement(2592540..2593277)
Genome browser
AA seq
245 aa
AA seq
DB search
MPEGPSLVILREETTRFVGKEIARASGNSKTVDLPSLEGQKIVSLRSWGKHFLIELPHTV
LRIHFMLFGSYRIDERKDKPPRMALEFTDGSELNFYACSVKHIDPDLDAIYDWDADIMSP
TWDPAKARKKLRAAPDMLACDALLDQTIFAGVGNIIKNEVLFRIRLHPLSTIGALPAPKL
RALVEQARQYSFDFLEWKKQYVLKQHWLAHRKSTCPRCAIPFSKGHLGLTKRRAFYCEKC
QKRYG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaggaccatcactcgtcatcctgcgcgaagaaaccacccgtttcgtcggcaag
gaaattgcccgtgccagcggcaacagcaagactgtcgacctgcccagcctggagggacag
aaaatcgtgtcgctgcgcagctggggcaagcatttcctcattgaattgccgcacacggtg
ctgcgcattcacttcatgctgttcggcagttaccgcatcgatgaacgcaaggacaagcca
ccgcgcatggcattggaatttaccgatggcagcgaactgaatttctacgcctgctcggtc
aagcacatcgaccccgacctcgatgccatctacgactgggacgcggacatcatgtcgccg
acctgggatccggccaaggcgcgcaagaagctgcgcgccgcgccggacatgctggcctgc
gacgccctgctcgaccagaccattttcgccggcgtgggcaacatcatcaagaatgaagtg
ctgttccggatccgcctgcatccgctctcgaccatcggcgcgctgccggcgcccaagctg
cgcgccctggtggagcaggcgcgtcaatatagcttcgatttcctcgaatggaaaaagcaa
tacgtgctcaaacagcactggctggcgcaccgcaagagcacctgtccgcgctgcgccatt
ccgttttcaaaaggacacctggggctgacaaaacggcgcgcattttactgcgaaaaatgc
caaaaacgctacggctga
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