Massilia antarctica: IV454_13395
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Entry
IV454_13395 CDS
T08186
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
manc
Massilia antarctica
Pathway
manc03420
Nucleotide excision repair
manc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IV454_13395
03430 Mismatch repair
IV454_13395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_13395
Enzymes [BR:
manc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IV454_13395
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IV454_13395
MMR (mismatch excision repair)
Other MMR factors
IV454_13395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QPI52385
UniProt:
A0AA49AB31
LinkDB
All DBs
Position
2965505..2967817
Genome browser
AA seq
770 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPSGIMAVTF
TNKAAKEMLTRLSAMLPVSTRGMWIGTFHGLCNRFLRTHYRDCALPQTFQILDSQDQLSM
IKRLLKANNIDDEKYPPKNLMYFINNAKDQGLRANRVEAHDPIERKMVELYELYDNQCQR
EGVVDFAELLLRAYELLERNQPLREHYQARFKHILVDEFQDTNDLQYNLLKLLAGHGQQV
AGALFAVGDDDQSIYAFRGANVGNMSAFEREFRVENLIKLEQNYRSHGHILDSANHLIAN
NSKRLGKNLRTDAGHGEPVRIYEASSDLEEAQWIIEEAKSLMAEGALRREIAILYRSNAQ
SRVIEHALFAAGLPYTVYGGQRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
MRSIEALQAAAEQYGISLYAAVPYVAGKSGSSLNSFVKLVEGARFETQQLALPETVRLVL
EASGLLQHYQNEKEGADRIENLEQMVNAATQFVQEEGFGQGAPAYMGPKAQASAGELILD
GDGTEIIDADIPLNTIMSPLSAFLSHASLEAGDAQAQAGQDALQLMTVHSAKGLEFDAVF
ITGLEEGLFPHESSSREMDGVDEERRLMYVAITRARKRLYMSFTQTRMLHGQTRYNMKSR
FFDELPEDALKWISPRVQSHWFGNKKSAWDDAKFSSGGSDNKIAQQIAQKAASGGPGWRI
GESVEHAKFGEGVIVNIEGGGSNARAQINFGKAGMKVLDLSVAKLERVAR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctcctccataacctcaatcccgaacaactcgccgccgtcaccctgccagcg
cagagcgccctgatcctggcgggcgccggctccggcaaaacgcgcgtgctgacgacccgc
atcgcctggctgatccagaccggccaggtgtcgccgtccgggatcatggcggtgacgttt
accaacaaggcggcgaaggaaatgctgacccgcctgtcggccatgctgccggtaagcacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttcctgcgcacccattac
cgcgattgcgcgctgccgcaaaccttccagattctcgattcccaggatcagctgtcgatg
atcaagcgtttgctgaaagcgaacaatatcgatgacgagaagtatccgcccaagaatctg
atgtatttcatcaacaacgccaaggaccagggcttgcgcgccaaccgggtcgaggcgcac
gacccgatcgaacgcaagatggtcgagttgtacgaactgtacgacaaccagtgccagcgc
gaaggcgtggtcgacttcgccgaattgctgctgcgcgcctacgaactgctagaacgcaac
cagccgctgcgcgagcattaccaggcccgcttcaagcatatcctggtcgacgagttccag
gataccaatgacttgcaatacaacttgctcaagctgctggcggggcatggccagcaggtg
gccggcgccctgttcgccgtgggcgacgacgaccagagcatttacgccttccgcggcgcc
aatgtcggcaatatgagcgccttcgagcgcgaattccgggtcgagaacctgatcaagctg
gagcagaactaccgctctcacggccacatcctcgacagcgccaaccacctgatcgccaac
aacagcaagcgcctgggcaagaacctgcgcaccgatgccggccacggcgagccggtgcgc
atctacgaagcctcgtccgacctggaagaggcgcagtggatcatcgaagaagccaagagc
ctgatggctgaaggtgcgctgcgccgcgagatcgcgatcctgtaccgctccaatgcgcaa
tcgcgcgtgatcgagcatgccctgttcgcggccggcctgccgtacaccgtctacggcggc
cagcgctacttccagcgcgccgaggtcaagcacgccatcgcctacctgcagctgatggac
aatccgcataacgattcggcgtttttgcgcgtggtgaatttccccacgcgcggcatcggc
atgcgttcgatcgaagcgctgcaggcggccgccgagcagtacggcatttcgctgtacgcg
gcggtgccttacgtggcgggcaagtccggttcctcgctgaacagcttcgtgaaactggtc
gaaggggcccgcttcgagacacagcaactggcgctgcccgaaacggtgcgcctggtgctc
gaagcgagcggcctgctgcagcactaccagaacgaaaaagaaggcgccgaccgcatcgag
aacctggaacagatggtcaatgcggccacccagttcgtccaggaagaaggcttcggccag
ggcgccccggcctacatgggaccgaaggcgcaggccagcgcgggcgagctgattctcgat
ggcgacggcaccgagatcatcgacgccgacatcccgctcaacaccatcatgtcgccgctg
tcggcgtttctgtcgcacgcctcgctcgaagcgggcgacgcccaggcccaggctgggcag
gatgcgctgcaactgatgacggtgcactcggccaagggactcgaattcgacgccgtgttc
atcaccggactggaagaaggcttgttcccgcacgagagcagctcgcgcgagatggatggc
gtcgatgaagaacggcgcctgatgtacgtggccatcacgcgcgcgcgcaagcgcctgtac
atgagcttcacgcaaacgcgcatgctgcacggccagacccgctacaacatgaaatcgcgc
ttcttcgacgagctgccggaagacgcgctcaagtggatttcgccgcgcgtgcagtcgcac
tggttcgggaacaaaaaatcggcctgggatgacgccaagttcagcagcggcggttcggac
aacaagatcgcccagcagatcgcgcagaaagcggccagcggcgggcccggatggcgcatc
ggcgaatcggtggaacacgccaagttcggcgaaggggtgattgtcaatatcgaaggcggc
ggcagcaatgcgcgcgcccagatcaatttcggcaaggccggcatgaaagtgctcgacctg
tcggtcgccaagctcgaaagagtggcgcgataa
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integrated database retrieval system
