Massilia antarctica: IV454_13415
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Entry
IV454_13415 CDS
T08186
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
manc
Massilia antarctica
Pathway
manc03030
DNA replication
manc03410
Base excision repair
manc03420
Nucleotide excision repair
manc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IV454_13415 (polA)
03410 Base excision repair
IV454_13415 (polA)
03420 Nucleotide excision repair
IV454_13415 (polA)
03440 Homologous recombination
IV454_13415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manc03032
]
IV454_13415 (polA)
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_13415 (polA)
Enzymes [BR:
manc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IV454_13415 (polA)
DNA replication proteins [BR:
manc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IV454_13415 (polA)
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IV454_13415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IV454_13415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QPI52389
LinkDB
All DBs
Position
2970528..2973272
Genome browser
AA seq
914 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRQDYPAAYIACVFDA
KGKTFRDDMYPKYKATRASMPDDLRLQIEPIHEVVRHMGWPILMVDGVEADDVIGTLSVL
ASSLGMNTVVSTGDKDLAQLVNDKVTLINTMSNEKLDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNIPGVAKCGPKTALKWLALHDSLDGVIANAASIGGAVGENLRQALPWLPQGRALIT
VKTDCDLAAHMASIADTLVAQPENKEALKAFFERYGFKTLLREVVQRDDEGAPRALLNSP
EGDLFPGAVVPVMRGEYETVVTEADLERWLALVDAAELTSVDTETTSLDPMTAQMVGISL
SVEAGKGAYIPLAHRYAGVPEQLNREAVLARMKGWLEDASKPKLGQNLKYDSHIFANHGV
TLRGIVHDTLLESYVFESHKPHDMDSMALRHLGYTTIPFTEVCGKGAGQICFDQVDLERA
TEYAAEDSDITLRLHQAMKGHVESDDKLHFIYRQIELPTSVVLHKIERNGVLIDAELLNV
QSGELGARIMELEQKAYELAGGPFNLGSPKQIGEIFFGKLQLPVIKKTPSGAPSTDEEVL
QKLAEDFPLPKILLEYRGMSKLKSTYTDKLPKMVNRDTGRVHTNYAQAVAVTGRLSSNEP
NLQNIPIRTAEGRRIREAFIAGPGNVIVSADYSQIELRIMAHISEDAAMLRAFAEGEDIH
RATAAEIFGVPPAEVQGEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQNYIDKYFAR
FSGVRQYMEDTRMQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTAAD
LIKLAMIAVQDWLEADKLATRMIMQVHDELVLEVPQAELELVKTRLPQLMAGVAALKVPL
LAEVGIGKNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataccctgctgttagtcgacggttccagttatctgtaccgtgcttttcacgcc
ctgcctgacctgcgcagcccggacggccatcccaccggcgccatgcacggcatggtcaat
atgctgcgccgcctgcgccaggattatccggccgcttacatcgcttgcgtgttcgatgcc
aagggcaagacttttcgcgacgatatgtatccgaagtacaaggccacgcgcgcgtccatg
ccggacgacctgcgcctgcaaatcgagccgatccacgaggtggtgcgccacatgggctgg
ccgatcctgatggtcgacggggtcgaggccgacgatgtcatcggcaccctgtcggtcctg
gcatcgagcctgggcatgaacaccgtcgtctccaccggcgacaaggacctggcgcagctg
gtcaacgacaaggtcaccctgattaacacgatgagcaacgagaagctcgacgaagccggc
gtgctggccaagttcggcgtgccgcccaaccgcatcatcgattacctcacgctcatcggc
gatacggtcgacaatatccccggcgtggccaagtgcggccccaagaccgccctcaagtgg
ctggcgctgcacgacagcctcgatggcgtgatcgccaacgcggcatccatcggcggcgcg
gtcggcgagaacctgcgccaggcgctcccctggctgccgcagggccgcgccctgatcacc
gtcaagaccgattgcgacctggccgcgcacatggcgtcgatcgccgacaccctggtggcg
cagccggaaaacaaggaagccctgaaagccttcttcgagcgttacggcttcaagaccttg
ctgcgcgaagtggtccagcgcgacgacgagggcgccccgcgcgcgctgctcaattctccc
gagggcgacctgttccccggcgcggtggtgccggtcatgcgcggcgaatacgaaaccgtg
gtcaccgaggccgacctggaacgctggctggcgctggtcgatgccgccgaactgacctcg
gtcgataccgaaaccacctcgctcgacccgatgacggcgcagatggtcggcatttcgctg
tcggtcgaagcgggcaagggcgcctatatcccgctggcgcaccgctacgcgggcgtgccc
gaacaattgaaccgcgaggcggtcctggcgcgcatgaagggctggctggaagatgcgtcc
aagccgaagctgggccagaacctcaagtacgacagccacattttcgccaaccacggcgtg
accctgcgcgggatcgtgcacgataccctgctcgaatcctatgtgttcgagtcgcacaag
ccgcacgacatggacagcatggccttgcgccacctgggctacaccacgattcccttcacc
gaggtatgcggcaagggcgccggccagatctgcttcgaccaggtggaccttgagcgcgcg
accgaatacgcggccgaggattccgacatcaccctgcgcctgcaccaggccatgaagggc
catgtcgagagcgacgacaagctccatttcatctaccgccagatcgagctgcctacttcc
gtggtgctgcacaagatcgagcgcaacggggtgctgatcgatgccgaactgttgaacgtg
cagtcgggcgaactcggtgcgcgcatcatggagctcgaacagaaggcgtacgagctggcc
ggcggtccgttcaatctcggttcgcccaagcagatcggcgagattttcttcggcaagctg
cagctgccggtcatcaagaagacgccgagcggcgcgccctcgaccgacgaggaagtgctg
caaaagctggccgaggatttcccgctgccgaaaatcctgctcgaataccgcggcatgtcc
aagctcaagtcgacctacaccgacaagctgcccaagatggtcaaccgcgacaccggccgc
gtgcacaccaactacgcgcaggcggtggcggtgacggggcgcctgtcgtcgaacgagccg
aatctgcagaacatcccgatccgcaccgccgaaggacgccgcatccgcgaagccttcatc
gccggtccaggcaacgtgatcgtgtcggccgactattcgcagatcgagctgcgcatcatg
gcccatatttcggaagacgcggccatgctgcgcgcttttgccgagggcgaggatatccac
cgcgccaccgccgccgaaatcttcggcgtgcctccggccgaggtgcagggcgagcagcgc
cgctatgcgaaggtcatcaacttcggcctgatctacggcatgagcgccttcgggctggcc
tccaacctgggcatcgaacgcgcggcggcgcaaaattatatcgacaagtacttcgcgcgc
ttttccggcgtgcgccagtacatggaagacacgcgcatgcaggccaaggcgcgcggctat
gtcgaaaccgtgttcggacggcgcctgtggctgccggagattaattcgccgaacgggccg
cgccgccagggcgcggaacgggccgcgatcaacgcgccgatgcagggcacggcggccgat
ctgatcaagctggccatgattgcggtgcaggactggctggaggccgacaagctggccacg
cgtatgatcatgcaggtgcacgatgaactcgtgctcgaagtgccgcaggcggaactggag
ctggtcaagacccggctgccgcaattgatggcgggtgtggcggccctgaaggtgcccttg
ctggccgaggtgggtattggcaaaaactgggacgaagcacactaa
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