Massilia antarctica: IV454_14835
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Entry
IV454_14835 CDS
T08186
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manc03009
]
IV454_14835
Enzymes [BR:
manc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
IV454_14835
Ribosome biogenesis [BR:
manc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IV454_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QPI52645
LinkDB
All DBs
Position
3301986..3304091
Genome browser
AA seq
701 aa
AA seq
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MNPTKPTETSSADVTGMDEAVTKPKRRTKAQIEADAAAGIDAPKPKRAAARKAAVEGEAA
VPAQADAPGDSPAEAKAAAKPRARKAVAVAADASAPAAAVAPVAAAPAAAPASAAPLADA
PVPAARKPRAPKAVAAEAAPAPASDAAPADGAAPANQERGPRPPRGPRQMRELRGQREAR
VQMERAESGEPEVVAEAPAEPVVRPERGARPERSLDAKPRVKKNKKGNPGLQHHGKNKMN
DADAAFSYVTSDAFDANDGGRAQPAKLVRRDLTSDDDAPKLHKVLAEAGLGSRRDMEDLI
VAGRVSVNGEPAHIGQRILPTDAVRINGKLIHRKVTSKPPRVLVYHKPAGEIVSHDDPEG
RPSVFDRLPTMKAGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIDREYAVRTLGE
LEEGMRQKLLAGVELDDGVASFTKIADGGGEGINKWYRVVIGEGRNREVRRMFEAIGLTV
SRLIRTRYGIMTLPSNLKRGRWDEMEENTVRDLLVAFGVEKKGAGADARGPKGRGEAKPR
SDEDKRSDGNRIDRVDANRNADPFGPPNGRGGAGRGAGGRPQGRPGGAGGMGGMGGQPRS
AGGFDGQSRGQGRPQGDGQPRSARPQGDAQPRSGRPGGGNGGNGGNGGNGGNGGGAKGPR
QPDPLQTTFGFGNAGGGNRRPQGPQGPRSADHGMPRRGRRG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaactaaaccgactgagacaagtagcgccgacgtaacaggcatggatgaggcc
gtaaccaagccgaaacgccgcaccaaggcacagatagaggcggacgccgccgccggcatc
gacgcgccgaaaccgaagcgcgccgccgccaggaaggccgccgtcgaaggcgaggccgcc
gtaccagcccaggccgacgcgccaggcgattcgccagccgaggccaaggctgcggccaag
ccgcgggccaggaaagccgtcgccgtggcggcggatgcgtccgcccctgccgccgccgtc
gcaccggttgccgctgccccggcggccgcgcccgcaagcgcagcgccgctcgccgacgcg
ccagtcccggccgcccgcaagccgcgcgcgccaaaagcagtcgccgccgaggccgcgcct
gcgccggcaagcgatgccgctccagccgacggcgccgcgcctgcgaaccaggaacgcggt
ccacgtccgccacgcggtccgcgccagatgcgcgaactgcgcggccagcgcgaagcgcgc
gtccagatggagcgcgccgaatcgggcgagccggaggtggtcgcagaagcacccgccgag
ccggtggtccgccctgagcgcggtgcgcgccccgagcgcagcctcgatgccaagccgcgc
gtgaaaaagaacaaaaaaggcaatccgggcttgcagcatcacggcaagaacaagatgaac
gatgccgatgccgcgttttcgtacgtgacctcggacgccttcgacgccaacgatggcggc
cgcgcgcagccggccaagctggtgcgccgcgacctgacctccgacgacgacgcgccgaag
ctgcacaaggtgctggccgaagccggtctcggttcgcgccgcgacatggaagacctgatc
gtcgccgggcgcgtttcggtcaatggcgagccggcccacatcggccagcgcatcctgccg
accgacgccgtgcgcatcaacggcaagctgattcaccgcaaggtcaccagcaagccgccg
cgcgtgctggtgtaccacaagccggccggcgaaatcgtcagccatgacgatccggaaggc
cgtccttcggtgttcgaccgcttgccgaccatgaaagccggcaaatggctggccgtcggc
cgcctcgacttcaataccgaaggcttgctgctgtttacgacctcgggtgacctggccaac
cgcctgatgcacccgcgctacaacatcgaccgcgagtacgccgtgcgtaccctgggcgag
ctggaagagggcatgcgccagaagctgctggccggcgtcgagctcgacgacggcgtggcg
tccttcaccaagatcgccgacggcggcggcgagggcatcaacaaatggtaccgcgtggtc
atcggcgaaggccgcaaccgcgaggtgcgccgcatgttcgaagcgatcggcctgaccgtc
tcgcgcctgatccgtacccgctacggcatcatgaccctgccaagcaacctcaagcgcggt
cgctgggatgagatggaagaaaacaccgtgcgcgacttgctggtcgcatttggcgtcgag
aagaagggcgccggcgccgatgcgcgcggtccgaaaggccgcggcgaggccaagccgcgc
agcgatgaagacaagcgttccgatggtaaccgcatcgatcgggtcgacgccaaccgcaat
gccgatccgtttggtccgccaaacggacgtggcggcgcgggacgcggcgccggtggccgt
ccgcagggacgtccgggtggcgccggcggcatgggcggcatgggcggccagccgcgcagc
gccggcggtttcgatggccagagccgtggccagggtcgtccgcagggtgatggccagccg
cgttcggcgcgtccgcagggcgatgcgcagccgcgcagcggccgtccgggtggcggcaat
ggtggcaatggcggcaatggcggcaatggtggtaacggcggcggggccaaggggccgcgt
cagcccgatccgctgcaaacgaccttcggtttcggcaatgccggcggcggtaatcgccgt
ccgcagggtccgcaaggcccgcgcagcgccgatcacggcatgccgcgccgcggtcgccgg
ggttaa
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