Massilia antarctica: IV454_14860
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Entry
IV454_14860 CDS
T08186
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manc03016
]
IV454_14860 (truB)
Enzymes [BR:
manc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IV454_14860 (truB)
Transfer RNA biogenesis [BR:
manc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IV454_14860 (truB)
Prokaryotic type
IV454_14860 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPI52650
UniProt:
A0AA48WH62
LinkDB
All DBs
Position
3310134..3311057
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AA seq
307 aa
AA seq
DB search
MKQAHIKRMRDLVDGVLLLDKPVGLSSNDALIKAKRVLNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYETTVHLGITTTTGDTEGEAIDMRDVDVTLAQIEAVLPQFRGP
IMQVPPMYSALKRDGKAYYEYAREGITLEREARPVTILKLELMSFETPLLKLAVTCSKGT
YIRVLGEDIGHALGCGAHLIQLRRTQVGALTIDGMVTLEALQAHAEPLSLLAPVDALLSS
FPAVQLTEELAKRFLQGQRLALGKEALTLPDSLGRVRVYHETRLLGTANLQEYAILAPER
LIAAVHA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagctcatatcaaacggatgcgcgacctggtcgacggcgtgctgctgctcgac
aaaccggtcggcctgtcgtccaacgacgcgctgatcaaggccaagcgcgtgctcaacgcc
aagaaagccggccacaccggcacgctcgacccgttcgccaccggcttgttgccgctgtgc
ttcggcgaagcgaccaagttctcgcaagacttgctcgaagccgacaagacctatgagacc
acggtccacctgggcatcaccaccaccaccggcgacaccgagggcgaagcgatcgacatg
cgcgacgtcgacgtcaccctggcccagatcgaagccgtgctgccgcagttccgcggtccc
atcatgcaagtgccgccgatgtattcggcgctcaagcgcgacggcaaggcctattacgaa
tatgcgcgcgaaggcatcaccctggagcgcgaagcgcgcccggtcaccatcctcaagctg
gaactgatgtcgtttgaaacgccgctgctgaagttagcggttacctgcagcaagggcacg
tatatccgcgtgctgggcgaagacatcggccacgcgctcggctgcggcgcccacctgatc
cagctgcgccgcacccaggtcggcgcgctgaccatcgatggcatggtgaccctggaagcc
ttgcaggcccatgccgagccgctcagcctgctggcgccggtcgatgccttgctgtcgagt
tttccggcggtgcagttgaccgaggaactggccaagcgcttcctgcaggggcagcgcctg
gcgctcggtaaggaagcgctcacgttgccggacagcctgggccgggtgagggtgtatcac
gagacccgcctgctgggcacggccaatttgcaggaatacgcgatcctggcacccgagcgc
ctgatcgcggccgtgcacgcgtaa
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integrated database retrieval system
