Massilia antarctica: IV454_18495
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Entry
IV454_18495 CDS
T08186
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
manc
Massilia antarctica
Pathway
manc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IV454_18495 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_18495 (recO)
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IV454_18495 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IV454_18495 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QPI47585
UniProt:
A0AA49A6I4
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All DBs
Position
4128850..4129653
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AA seq
267 aa
AA seq
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MPTNEADLSVAVAAPAALPQPPSARRRVPQRGERVSGQPAFVLHSYPYKETSLIVDMFTR
DFGRVGLVAKGAKRPLSKLRGVLQTFQPLQAGWSGKSELRTLIDAEWVGGMLPLEKTALL
CGFYLNELLVKLIARDDPHPALFDHYVSTLNQLAHNEPAPIVLRKFERALLKETGVAADL
TRCTSTRAQVEPDGDYVVDPERGARPARESDSWPAVSGKTLLDMEREDYSDPVTQAQSKA
LMRFLLAHQLGGSPLNTRQILIDLMQL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaacgaggccgacctgagcgtcgccgtagcggctcccgcggcgctgccgcag
ccgccgtccgcgcggcggcgcgtaccccagcgcggcgagcgggtcagcggtcagccagcg
ttcgtgctgcacagttatccctacaaggaaaccagcctgatcgtcgacatgttcacgcgc
gacttcggccgcgtggggctggtcgccaagggcgccaagcggccgctgtcgaaactgcgc
ggcgtgctgcagaccttccagccgctgcaagccggatggagcggcaagtccgaactgcgc
accctgatcgacgccgagtgggtgggcggcatgctccccctcgaaaagaccgcgctgctg
tgcggcttctacctcaatgaactgctggtcaagctgatcgcgcgcgacgacccgcacccg
gccctgttcgaccactacgtctcgaccctgaaccagttggcccacaacgaaccggcaccg
atcgtcttgcgaaaattcgaacgggccttacttaaagagacgggcgtggccgccgacctg
acccgctgcaccagcacccgcgcgcaagtcgagccggacggcgactacgtggtcgacccc
gagcgcggcgcgcgcccggcgcgcgaatcggacagctggccggcggtgagcggcaagacc
ctgctcgacatggagcgcgaagactacagcgaccctgtcacgcaggcgcagagcaaggcg
ctgatgcgcttcctgctggcccaccagctgggcggatcgcccctgaacacgcgccagatc
ctgatcgacctgatgcagttatag
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