KEGG   Massilia antarctica: IV454_18710
Entry
IV454_18710       CDS       T08186                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
manc  Massilia antarctica
Pathway
manc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:manc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IV454_18710
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:manc02044]
    IV454_18710
Secretion system [BR:manc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IV454_18710
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QPI47620
LinkDB
Position
complement(4178552..4179895)
AA seq 447 aa
MNSTNTLGFDPLGQLGRRGDHFVAPNPGGASTTPGAGAVGADAAAAPPPGPRIHSGSNPL
VALANPLLNLIPQIRTTVHHADPAMLRGQLLAELRQFETRAREAGIANETIIGARYCLCT
TLDEAATLTPWGGGGVWSASSLLVTFHNETWGGEKFFQLLSRLAPYPAQHIDLLELQYFC
LMLGFEGRYRVLDQGRSQLDLLKQRMLQLIRTQRGEHAGALSPHWHDPVMAARAQRKVPP
WAVASVAALACVGLFIALQWSLSSRSDEVHAAIDQLRAPRVVASAAKPSPAAQTRRLAQF
LETEIAEKLVSVLDLSERSTIIIRGDSLFESGAATVSGNPAHAALLARIGKALNAVPGAV
LVVGYTDDVPTRGLRFASNWELSVARAESVKNVLQALLDQPGRLRAEGRGAFEPAVPNDS
PANRARNRRVEITLMVPPAAPSAESAP
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaactccaccaataccctcggtttcgatccgctcggccagctgggccggcgcggcgac
cattttgtcgcgcccaatccgggtggcgcgtcgaccacgccgggcgctggcgcagttgga
gccgatgccgccgctgcgccgcctcccggcccacggatccacagcggcagcaacccgctg
gtggcgctggccaacccgctgctcaatctcattccacagattcgcacgaccgtgcatcac
gccgatccggccatgctgcgcgggcagttgctggccgaattgcgccagttcgaaacccgc
gcccgggaagcgggcattgcgaacgaaaccattatcggcgcacgctactgcctctgcacc
acactcgacgaagcggccaccctgacgccctggggcggcggtggcgtctggtcggccagc
agcctgctggtgacgtttcataacgaaacctggggtggagaaaaattcttccagttactg
tcgcgcctggcgccctatccggcccagcacatcgatctgctcgaacttcaatatttctgc
ctgatgcttggcttcgaaggacgctaccgggtgctcgaccagggccgctcgcagctcgac
ctgctcaagcagcgcatgctgcaactgatccgcacccagcgcggcgagcatgccggcgcc
ctgtcaccgcattggcacgatccggtcatggccgcgcgtgcgcagcgcaaggtgccgccg
tgggcagtcgccagcgtggcggcgctggcctgtgtcggcttgttcatcgctctccagtgg
tcgctgtcgtcgcgctccgatgaggtccatgccgcgatcgaccagctgcgcgccccgcgc
gtggtcgccagcgccgccaagccctcccccgcagcgcaaacgcgccgcctggcgcagttc
ctggaaacggaaatcgccgaaaagctggtcagtgtgctggacctgagcgagcgcagcacg
atcatcatccgcggcgacagcttgttcgagtcgggcgccgcgactgtcagcggcaacccg
gcgcacgcagccttgctggcgcgcatcggcaaggcgctcaatgccgtccctggcgcggtg
ctggtggtcggctacacggacgatgtgccaacccgcggcttgcgcttcgcatccaactgg
gagctgtcggtagcgcgcgccgagagcgtcaagaacgtgctgcaagcgctgctcgatcaa
ccaggccgcctgcgcgccgaaggccgcggtgcctttgagccggccgtgccgaacgacagt
ccagccaaccgggcgcgcaaccgtcgcgtcgaaattaccttaatggtgccgccggcggcg
ccaagcgccgagtccgcaccatga

DBGET integrated database retrieval system