Massilia antarctica: IV454_19170
Help
Entry
IV454_19170 CDS
T08186
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
manc
Massilia antarctica
Pathway
manc00040
Pentose and glucuronate interconversions
manc01100
Metabolic pathways
manc01120
Microbial metabolism in diverse environments
manc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IV454_19170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IV454_19170
Enzymes [BR:
manc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IV454_19170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QPI47701
UniProt:
A0AA49A616
LinkDB
All DBs
Position
4275791..4277236
Genome browser
AA seq
481 aa
AA seq
DB search
MKKTILALSVMLASAAQAAPIDASTFVGASTPLQTAPYGVRNYSAPVLVGGLHDPASYMA
APKLPAWQFAQVDPTGGVLTFERQSAPATGWHTWSRKGRVVVSGGSAARADRIYTVFNGQ
QLVAAINQAGNEPKIIRVVGHIDLRWSQNNTVFKEYTSFSDQKNGGSINLPSNTTLVGIN
DAQGRPARITGTALLIGAEMPLAPGGDPEVDFKKWIKDGKDGEAYPTWTRNIIVRNLVID
TPWDVNPEDSDNAYADGITVSRAQNIFIDHVTVSDGDTPESLATGTYKTRHDGALDVVRG
SDYVTIANSTFSTHHKTTLVGNGDGGRAWSDEGRLHVTFAGNWWNGVAARLPLNRFGQVH
MFNNLVTGNVMTKDTDVKFESGSDARYRSNMLLENNYYNITGVKLSEFCGKVIKGKGFIG
FRSSGHIFTSDRAGTNAVDGQCGMARPDAAKLWTPPYLYALQTATSTESAVPAQAGAGKL
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaccatactcgccctcagcgtcatgctggcatcggccgcccaggcggccccg
atcgacgccagcaccttcgtcggcgcaagcacgcccctgcaaacggcgccttacggcgtg
cgcaactactcggcgccggtgctggtgggcggcctgcacgaccccgccagctacatggcc
gcgcccaagctgccggcctggcagttcgcccaggtcgacccgaccggcggcgtgctcacc
ttcgagcgccagagcgcgccggcgaccggctggcatacctggtcgcgcaagggcagggtg
gtggtcagcggcggcagcgcggccagggccgaccggatctacaccgtctttaacggccag
cagctggtggccgccatcaaccaggccggcaatgaaccgaagatcatccgcgtggtcggc
catatcgacttgcgctggagccagaacaacacggtgttcaaggaatacaccagtttttcg
gaccagaaaaacggcggctcgatcaacctgccgtcgaataccaccctggtgggcatcaac
gacgcccagggccggccggcgcgcatcaccggcacggcgctgctgatcggcgccgaaatg
ccgctggcgccgggcggcgaccctgaagtcgacttcaagaaatggatcaaggatggcaag
gatggcgaggcgtatccgacctggacccgcaacatcatcgtgcgtaacctggtgatcgac
acgccgtgggacgtcaatcccgaggattcggacaacgcctacgccgacggcatcaccgtc
tcgcgcgcccagaacatcttcatcgaccacgtgaccgtgagcgatggcgatacccccgaa
tcgctggcgaccggcacctacaagacccgccacgatggcgcgctcgacgtggtgcgcggc
agcgattacgtcaccatcgccaacagcaccttttccacccatcacaagaccaccctggtg
ggcaatggcgatggcggccgtgcctggagcgacgagggccgcctgcacgtgacctttgcc
ggcaactggtggaacggggtggccgcgcggcttccgctgaaccgcttcggacaggtgcac
atgttcaacaatctcgtcaccggcaacgtgatgaccaaggataccgacgtcaagttcgaa
agcggctccgatgcccgctatcgctcgaacatgctgctcgaaaataactactacaacatc
accggggtcaagctgtccgagttctgcggcaaggtgatcaagggtaaaggttttatcggc
ttccgctcgtccggccacatctttaccagcgaccgcgccggcaccaatgccgtcgacggc
cagtgcggcatggcccggcctgacgcggccaagctgtggactccgccttacctgtatgcg
ctgcagacggccacctcgaccgagagcgcggtgccggcccaggctggcgccggcaagctc
aaataa
DBGET
integrated database retrieval system
