Massilia antarctica: IV454_24180
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Entry
IV454_24180 CDS
T08186
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manc03000
]
IV454_24180
Transcription factors [BR:
manc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IV454_24180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QPI48599
UniProt:
A0AA48WBR0
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All DBs
Position
complement(5491103..5492023)
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AA seq
306 aa
AA seq
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MPMITSTEDLRRWFLQSGVASPLDLCIGPLPRSKAALGRWSSGHAEHVVRSMSPHPGSYR
LSLMLSPLEARIWAGNKPVWGGMIAANRFRISPPGESGQWTQMSACDIVNIFIPVDLVDH
LGGLRNDGASNKLVANVFVQDRIVLDLVHKMLNAAAMAGQLAQEACDGLITVLVCYLLEH
YTQPTSVPERSGLCGSRLRSVLRHIAQSSAESVSNAELAALCGMSEAHFSREFRRAVGLP
PHQYMMKLRLERACAALLSEQARVLDIAQECGFTNASHFSRAFSSQYGMSPTIFRQQHRA
ATSTST
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgatcacgagcaccgaggacctgcggcgctggttcctgcagagcggggtcgcc
tcgccattggacctctgcattggtccattgccacgttcgaaagccgctttgggacgctgg
tccagcggccatgccgaacacgtggtccgttcgatgagtccgcatcctgggagttatcgg
ctttccctcatgctttctcctctggaggcacgtatctgggccggcaacaaaccggtctgg
ggtggtatgatcgctgcgaaccgttttcggatttccccccctggtgaatctggtcagtgg
acccagatgagcgcttgcgacatcgtcaatatcttcattccggtcgacttggtcgatcat
ctcggcggcctgcgcaatgatggcgccagcaataagctggtggccaacgtgtttgtgcag
gaccggatcgtgctcgacctcgtgcataaaatgctcaatgccgcagcaatggcgggacag
cttgcgcaagaggcgtgcgacggcttgatcactgtccttgtgtgttatttgcttgagcac
tatacccagccaaccagcgtgcccgagaggagcggcctctgcggcagcaggctgcgcagc
gtgctgcggcacattgcgcaaagctcggctgagtcggtgtcgaatgccgaacttgccgca
ctgtgcggcatgagcgaggcgcacttttcccgcgagttccggcgcgcggttggactgccg
ccgcaccaatacatgatgaagctgcgcctggaacgggcctgcgcggccctactgtcggag
caagcgcgggttctcgatatcgcgcaggaatgcggctttaccaacgccagtcatttctct
cgtgcattttcctcgcagtacggaatgtcgcccacgatcttccgccaacaacaccgggcc
gcaacatcaacgtcgacatga
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