Massilia antarctica: IV454_24200
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Entry
IV454_24200 CDS
T08186
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manc03009
]
IV454_24200
Ribosome biogenesis [BR:
manc03009
]
Prokaryotic type
ribosomal protein modification factors
IV454_24200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QPI48602
UniProt:
A0AA49A7B0
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All DBs
Position
complement(5495865..5498066)
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AA seq
733 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVVADQPVRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIDVELPADISDKDRQGILRSIERCTVKKVVQA
GPEFVINEVENLDADAQALLTLKPASGASTFIAGKDLPLEETIANMSGVLAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEFIERLNFNHFYGGTFWGED
IANAAFVHYPDERWFKPGRKDALPAGILDEYCLEIYNPDGELRGSHLIDTNSGNVQRGIC
SLPYVRKSDGAVVYFPSNLIENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKRDILEGEI
ALPDVPHEVLAKYPGILAGIEALEEQGFPVLVKDASLGGAYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPRPTFVSNAVTEPNNFVEHFIDSSGIVSWRF
FSAKADHDFVEWDFCSQGENANAEEAATLFGILEGMGKEVYMAAYDNLGAAACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDASLEALLDRLENSELDEYADIATLIGIE
FDENTVWGQLTTLELKLLIHLALQQFEETQELVQAFLQYNDNTVERGLFYQALNAVLEVQ
LDDDLELADYEVNFRRMFGNPRMDAVMGSVDGSVRFFGLTPTSMKLEGLDKHERLIDSYR
KVHTARANVAAKS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcaactttctcgataagcttcgtcttgaggccaagttcgatgatttc
acagtggtcgccgaccagcctgtgcgctacaagggcgatggctccgcgcctggtcccttc
gattacttcctggcctcatcggctttgtgcgcagcttacttcgtgaagttgtattgcgta
actcgcaatattcctaccgagaatatccgcctatcgcaaaacaatattgtagatccggaa
aatcgttaccagcagattttcaagattgatgtcgagttgccggcggatatctctgataaa
gaccgccaggggattcttcgctccatcgagcgttgtacggtgaaaaaagtggtgcaagcc
gggcccgagttcgtgatcaacgaggtggagaatctggacgccgatgctcaggcgttgctg
acgttgaaaccagcgtccggggccagcaccttcattgcgggcaaggatctgccgttggaa
gaaaccatcgccaatatgtccggcgtgctggcgggtttgggcatgaagattgaaatcgct
tcatggcgcaatatcgttcccaatgtgtggtcgctgcatatccgcgacgcccactcgccg
atgtgttttaccaacggcaagggatcgaccaaggaaagcgccttggcgtcggccttgggg
gagtttatcgagcgactcaatttcaatcatttttacggtggtacgttttggggcgaagac
atcgccaacgcggccttcgtgcattaccccgacgagcgctggttcaagcccggccgcaaa
gatgcgctaccggctggcattctggacgagtactgtctggagatttacaatcccgatggc
gagttacgtggctctcatctgatcgacaccaactccggcaacgtgcagcgcggtatctgt
tcgctgccgtatgtgcgcaagtccgacggcgcggtggtgtattttccgtccaacctgatc
gaaaacctctacgtcagcaatggcatgagcgccgggaatacgctggccgaagcgcaggtg
caatgcctgtcggagattttcgaaagggcggtcaaacgcgacatcctggaaggggaaatc
gcattgccggacgtgccgcacgaggtgctggcgaagtaccctggcattctggccggcatt
gaggcattggaagagcagggcttcccggtgctggtcaaggatgcgtcactgggcggggct
tacccagtgatgtgcgttaccttgatgaatccacggacgggcggcgtgtttgcctcgttc
ggagcgcatccaagcttcgaggtggcactggaacgtagtcttacggagttgctgcagggt
cgcagttttgaaggcttgaacgatttgcctcggcccaccttcgtcagtaacgccgtcacc
gagccgaataattttgttgaacacttcatcgattccagcggtatcgtgtcgtggcgcttt
ttcagtgccaaagccgatcatgattttgttgagtgggatttttgcagccagggcgagaac
gccaatgccgaggaggccgcgaccttgttcggcatcctcgaaggcatgggaaaagaagtg
tatatggcggcctacgataatttaggcgccgccgcctgccgcattttggtgccgggatat
tcggaagtttatccggtggaagatttgatctgggataacacaaacaaggcgctgttgttc
cgcgccgatattttgaacttgcatcgactggacgatgccagcctcgaagcactcctcgat
cgtttggagaacagcgagctggacgaatacgccgacatcgccaccttgatcggcatcgaa
tttgacgagaatacggtctgggggcagctgacaacgctggagctgaagctgctgatccat
ctcgccttacagcaatttgaggagacgcaggagttggtgcaagccttcctgcagtacaac
gacaacacggtcgagcgaggattgttttaccaagccttgaacgccgtgcttgaggtgcag
ctcgatgacgacctggaactggccgattacgaggtcaacttccgccggatgtttggcaac
cctcgcatggatgcggtcatggggtcggtggacggcagcgtgcgtttcttcggtttgacg
ccgacgagcatgaaactggaagggctcgacaagcacgaacgtctgatcgacagctacaga
aaagtgcatacggcacgggcgaatgttgcggctaaatcgtga
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