Massilia antarctica: IV454_25960
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Entry
IV454_25960 CDS
T08186
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
manc
Massilia antarctica
Pathway
manc02010
ABC transporters
manc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IV454_25960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IV454_25960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manc02000
]
IV454_25960
Transporters [BR:
manc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IV454_25960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
NucS_C
Motif
Other DBs
NCBI-ProteinID:
QPI48905
LinkDB
All DBs
Position
5885918..5887066
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AA seq
382 aa
AA seq
DB search
MCFHSGWVLRAAVLASLHGGVAQAQDVIRIGHVAATSGAIAHLGKDNENGARMAVDELNA
RGVLIGAKRYRIEMLAEDDAGDPKQGTVVAQKLVDAKVRGVIGHETSGTTIPASKIYFDA
GIPQISPSASNPKYTRQGFNTAFRNVANDEQLGAALARYAVQTGNARQIAVIDDRTAYGK
GLADEFIKNVKTAGQGARVVTQQYTTDKATDFSAILTVIKAAKPDLIFFGGMDAVAGPML
RQMKQLGLPVRFMGGDGMCSDSLARLAGEGMADGQVICAEAGGVDAQQQKGMDDFRAAYR
RRYGIDVMTYAPYAYDAMHAMVAAMQQAGSPDPAVYLPALAKVRHKGVTGVLAFDARGDV
KDGRLTLFTFKSGKRQRLQVIQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttccattctggatgggtgctccgggcggccgtgctggccagcttgcatggcggc
gtggcgcaggcgcaggacgtgatccgcatcgggcacgtggcggccacctccggcgccatc
gcccacctcggcaaggataatgaaaatggcgcgcgcatggcggtcgacgagctcaatgcc
aggggcgtgctgatcggcgccaagcgctaccgcatcgagatgctggccgaggacgacgcc
ggcgaccccaaacaaggcaccgtcgtggcgcaaaagctggtcgacgccaaagtgcgcggc
gtgatcggccacgaaacctcgggcaccacgatcccggcctcgaaaatttatttcgacgcg
ggcatcccgcaaatttcgccctcggccagcaatcccaagtacacgcgccagggcttcaac
acggcatttcgcaacgtcgccaacgacgagcagttgggcgccgcgctcgccaggtacgcc
gtacagaccggcaatgccaggcagattgccgtgatcgacgaccgcaccgcctacggcaag
ggcctggcggacgaattcatcaagaacgtcaagaccgccggccagggcgcgcgcgtggtc
acgcaacagtacaccaccgacaaggcgaccgatttcagcgccatcctgaccgtcatcaag
gccgccaagcccgacctgatcttcttcggcggcatggacgccgtggccggaccgatgctg
cgccagatgaaacagctgggcctgccggtgcgcttcatgggtggcgacggcatgtgttcc
gattcgctggccaggctggccggcgagggcatggccgatggccaggtcatttgcgcggaa
gccggcggcgtcgacgcccagcagcagaaaggcatggacgattttcgcgcagcctaccgg
cgccgctacggcatcgacgtgatgacctacgcgccgtatgcctacgacgccatgcacgcg
atggtggccgccatgcagcaggccggctcgcccgatccggccgtgtatctgccggcgctg
gccaaggtccggcacaagggcgtgaccggcgtgctcgccttcgatgcccggggcgacgtg
aaagatggccgcctgaccttgtttactttcaagagcggcaagcgccagcgcctccaggtc
atccagtaa
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