Massilia antarctica: IV454_26095
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Entry
IV454_26095 CDS
T08186
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
manc
Massilia antarctica
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
PAS
AAA_2
PAS_9
HTH_8
AAA_16
AAA
Mg_chelatase
Xre-like-HTH
MLTR_LBD
HTH_23
HTH_29
PAS_8
HTH_28
HTH_11
HTH_24
HTH_30
HTH_22
Phage_CI_repr
HTH_10
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
QPI53437
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Position
5924640..5925953
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AA seq
437 aa
AA seq
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MPIDPTIPAPPAPLSAQVQSLVSFLDHEAQPMIVLDPDYNILAANDAYRRQFGATGKPFI
GQKCYRVSHHYELPCDQAGEHCPMKKAQELRGPDRVLHIHHTPRGPEHVDVELRPIFDEH
GVITAYVERLSTVRSASARPSDGGLVGRAPAFNQALAALQRVAPSMLPVLLLGESGTGKE
LFARAVHATSARAGGPLVVVDCSGLSETLFESELFGHEKGAFTGAAVRKPGLVETAQDGS
IFLDEIGDVPLAMQVKLLRLIETGTYRRVGGVETLHANFRLIAATHKPLDAMVARGEFRQ
DLFYRINAFPIRLPPLRERADDIALLADSFLRRAGGGMRTLSIDPEALAALRRRAWPGNI
RELRNVLDHASLFADDGVIRVAHLPAAPALSSPVPKAAGGAFDDVPSQFAGTRSELAASL
GISERTLYRRLKRQAKG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgacccaactatcccggcgccgcccgcgccgctgtccgcgcaggtgcagtcg
ctggtgtccttcctcgatcacgaggcgcagccgatgatcgtgctcgatcccgactacaac
atcctcgccgccaatgacgcctaccggcgccagttcggcgccaccggcaagccgttcatc
ggccagaagtgctaccgcgtctcgcaccactacgagctgccctgcgaccaggcgggcgag
cattgtccgatgaagaaggcgcaggaattgcgcgggccggaccgggtgctgcacattcac
cacacgccgcgcggccctgaacatgtggatgtcgaattgcgcccgattttcgatgaacac
ggcgtcattaccgcgtacgtcgagcgcctgtcgacggtgcgcagcgcgtcggcgcggccc
agcgacggtgggctggtcggccgcgcgcccgccttcaaccaggcgctggcggcgttgcag
cgggtggcgccatcgatgctgccggtgctgctgctgggcgaatcggggaccggcaaggaa
ctgttcgcgcgcgccgtgcacgccaccagcgcgcgcgccggcggcccgctggtggtggtc
gactgctcgggcctgagcgaaaccctgttcgaaagcgaactgttcgggcatgaaaaaggc
gcgttcacgggtgcggcggtgcgcaagccggggctggtggagacggcgcaggacggcagc
atttttctcgatgaaatcggcgacgtgccgctggccatgcaggtcaagctgctgcgcctg
atcgaaacggggacgtaccggcgcgtgggcggcgtggaaaccttgcacgccaactttcgc
ctgatcgccgcgacccacaagccgctcgatgcgatggtggcgcgcggcgagttccggcaa
gacctgttttaccgcatcaatgcgtttccgatccgcctgccgccgctgcgcgagcgcgcc
gacgacatcgccctgctggccgattccttcctgcggcgcgccggcggcggcatgcgcacg
ctgagcatcgatccggaggcgctggctgcgctgcggcggcgagcgtggccgggcaatatc
cgcgagctgcgcaatgtgctcgaccatgccagcctgttcgccgacgatggcgtgatccgg
gtcgcgcatctgccggcggcgccggccctgtccagccctgtgccgaaggccgccggcggc
gcattcgatgacgtgccgagccagtttgcaggcacccgcagcgagcttgcggcgtcgctc
ggcatcagcgagcgcaccttgtaccggcgcctcaagcggcaggccaaggggtaa
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