Massilia antarctica: IV454_27535
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Entry
IV454_27535 CDS
T08186
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
manc
Massilia antarctica
Pathway
manc03420
Nucleotide excision repair
manc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IV454_27535
03430 Mismatch repair
IV454_27535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_27535
Enzymes [BR:
manc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IV454_27535
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IV454_27535
MMR (mismatch excision repair)
Other MMR factors
IV454_27535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
HHH_5
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPI49177
LinkDB
All DBs
Position
complement(6276655..6278745)
Genome browser
AA seq
696 aa
AA seq
DB search
MTAVPLAVSPDDPFASLNPAQRAAVEHDIGVAAGSARPLLVIAGAGSGKTNTLAHRVARL
IMSGADPQRILLLTFSRRAASEMTQRAGNVLHRIMGARGGQPPASLPWAGTFHSIGARLL
RDYAGRIGLEESFTIHDRGDSEDLMGMVRHEIGLTQTDKRFPLKGTCLAIYSRVVNSRET
LALVLQSTFPWCSEWESQLKTLFGAYVDAKQEQNVLDYDDLLLFWAEMAADPDLGAHIGG
QFDHILVDEYQDTNRLQAAILMGMKPGGEGVMVVGDDAQSIYSFRGATVRNILDFPKQFA
QEACIVTLDRNYRSTQPILDASNAVIGAALERHAKTLWTDKVSTVLPQVVLIPDEAEQAR
WVCNRILEHRETGMALKAQAVLFRAASHSAALELELMRRNIPFVKFGGLKFLEASHIKDV
LAVLRFAQNPSGRVAGFRVVQLVPGIGAATATRLLDAVAEAAEPLHAVEQFAAPAKSGGD
WPQFVALFRALRAPGLRWPADIELVKNWYLPHLERMHDDAQVRVADVEQLARLAGGHGSR
ETFLAEITLDPPEATSDRAGPPHLDEDYLILSTIHSSKGQEWKSVHVLNVVDGCIPSDMS
TGNAADIEEERRLLYVAMTRAKEHLHLVVPNRFFIKQQAQMGDRHVYAARTRFISPAMLK
HFEETVWMTADTPQSRKPMPDSVRMLVRERARNAWK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgttccccttgccgtttcccccgacgatcccttcgccagcctcaatcccgcc
cagcgtgccgctgtcgagcacgacatcggcgtggccgccggcagcgcgcggcccttgctg
gtgatcgccggcgccgggtctggcaagaccaataccctggcgcaccgggtggcgcgcctg
atcatgagcggcgccgatccccagcgcatcctgctgctcacgttttcgcgccgcgccgcc
agcgaaatgacccaacgcgccggcaatgtcctgcaccgcatcatgggtgcgcgcggcggc
cagcccccggccagtctgccctgggccggcaccttccacagcatcggcgcgcgcctgttg
cgcgactacgccggccgtatcggcctggaggaatcgtttaccatccacgaccgcggcgac
tccgaagacctgatgggcatggtgcgccacgaaatcggcctgacccagaccgacaagcgc
tttcccctcaagggaacctgccttgcgatttattcgcgcgtggtcaacagccgcgagacc
ctggcgctggtgctccaaagtacctttccctggtgcagcgaatgggaatcccagctcaag
accctgttcggcgcctacgtcgatgccaagcaggaacagaacgtgctcgattacgacgat
cttttgctgttttgggccgagatggcggctgatcccgacctgggcgcgcatataggcggc
cagttcgaccatatccttgtcgacgagtaccaggataccaaccgcctccaggccgcgatc
ttgatgggcatgaagccgggcggggagggcgtgatggtggtcggggacgatgcccagtcg
atttattctttccggggcgccacggtgcgcaatattctcgacttcccaaaacaattcgcc
caggaagcctgcatcgtcaccctggaccgcaattaccgttcgacccagccgatcctggac
gcttccaacgccgtgatcggtgccgcgctcgaacgccacgccaagaccttgtggaccgac
aaggtctcgaccgtcctgccgcaagtggtgctcattcccgatgaagccgagcaggcgcgc
tgggtctgcaatcgcatcctggagcaccgcgagacgggcatggcgctcaaggcgcaggcg
gtgctgttccgcgcggccagccacagcgccgcgctagagctcgaacttatgcgccgcaac
atccccttcgtcaaatttggcggcctcaagttcctcgaagcctcccatatcaaggatgtg
ctggcggtattgcgctttgcccagaatccgagcgggagagtggccgggtttcgcgtggtg
caactagtgcccgggatcggcgccgccaccgccacccgattgctcgatgcggtcgccgag
gcggccgagccgttgcatgcggtcgagcaatttgccgcgcccgccaagagcggcggcgac
tggccgcaattcgtcgccctgttccgcgccctgcgcgcgccggggctgcgctggccggcc
gatatcgagctggtcaagaactggtacctgccgcaccttgaacgcatgcatgacgatgcc
caggtaagggtggccgatgtggaacagttggcgcgcctggcgggcggccatggctcgcgc
gaaaccttcctggccgaaatcacgctcgacccgcccgaggcgaccagcgaccgtgccggg
ccgccccatctggacgaggattacctgattctctcgaccatccattcgtccaaggggcag
gagtggaagtcggtgcatgtgctcaacgtggtcgacggctgtattccgtccgacatgagt
accggcaatgccgccgatatcgaggaggaacgccgcctgctgtacgtggccatgacccgc
gccaaggagcatctgcacctggtggtgccgaaccggttcttcatcaagcagcaagcccag
atgggcgaccgccatgtgtacgcggcgcgcacgcgcttcatcagcccggccatgctcaag
cacttcgaggaaacggtgtggatgacggccgacaccccgcaaagccgcaaacccatgccc
gacagcgtgcgcatgctggtgcgcgagcgtgcccgcaacgcgtggaagtaa
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