Massilia antarctica: IV454_27915
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Entry
IV454_27915 CDS
T08186
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manc02000
]
IV454_27915
Transporters [BR:
manc02000
]
Other transporters
Pores ion channels [TC:
1
]
IV454_27915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
BON_like
Yop-YscD_ppl_1st
DUF748
Yop-YscD_ppl_2nd
DIP2116-like_N
HGLS
Motif
Other DBs
NCBI-ProteinID:
QPI49236
UniProt:
A0AA48WC56
LinkDB
All DBs
Position
6370009..6370776
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AA seq
255 aa
AA seq
DB search
MRHLLALFILLAGAVPAGAQTAAPQPGQVLVSGTVPDEASKQAVLARLREVYGADLVVDQ
ISVGQVATPANWNGYVQKLITPDLKSISHGQLKIDGSTVSIKGEVASEATRQKISGNVAA
SLNPTYTVNNTLRVSAADQSVLDTTLGNRIVEFESGKATLTPTGRAILDEMAAAMKKLKD
RKVDVIGHTDSQGNKITNQNLSQARAEAVKTYLIGAGIKGELLSPSGQGADRPVASNDSA
DGRARNRRIEFRMAQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccttctcgccctgttcatcctgcttgccggcgcagttcctgccggcgcccaa
accgccgccccccagccgggccaggtgctcgtctcgggcaccgtgcccgatgaagcgagc
aaacaggccgtgctggcgcgcctgcgcgaagtctacggcgccgacctggtggtcgaccag
atctcggtcggccaggtcgccacgccggccaactggaacggctatgtgcaaaaactgatc
acacccgacctcaagtcgatctcgcacgggcagctcaagatcgacggcagcaccgtcagc
atcaagggcgaagtggcgagcgaagcgacccgccagaaaatttccggcaacgtcgcggcc
agcctgaacccgacctacacggtcaacaataccttgcgcgtgtcggccgccgaccagagc
gtgctcgacaccaccctgggcaaccgcatcgtcgaattcgaaagcggcaaggccaccctg
accccgaccgggcgcgcgatcctcgacgagatggcggcagcgatgaaaaagctcaaggac
cgcaaggtcgacgtgatcggccacaccgatagccagggcaacaagatcaccaaccagaac
ctgagccaggcgcgcgccgaggcggtcaagacttacctgatcggcgccggcatcaagggc
gagctgctcagcccctccggccagggcgccgaccgcccggtcgccagcaacgacagcgcc
gacggccgcgcgcgcaaccgccgcatcgaattccggatggcgcaataa
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