KEGG   Massilia antarctica: IV454_27995
Entry
IV454_27995       CDS       T08186                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
manc  Massilia antarctica
Brite
KEGG Orthology (KO) [BR:manc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:manc02044]
    IV454_27995 (tssC)
Secretion system [BR:manc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IV454_27995 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QPI49252
LinkDB
Position
complement(6389558..6391042)
AA seq 494 aa
MSAQLTPASGAAATHETALLDQIVEQSKVAKSSVEHARAKDLISELVHQVMDGTVIVSDN
LSATIDARVAELDRMISDQLSAVMHAPEFQKLESSWTGLNYLVKNTSTSTTLKIKMFNAT
KRELVKDFQSALEFDQSSMFKKVYEEEFGTFGGAPFGSLLGDYQITRQPEDMYFVEQMSH
IAAAAHAPFITSASPELFGLESYSELGKPRDLAKIFDTVEYAKWKSFRESEDSRYVGITL
PRFLGRLPFHPADGATTEGFNFVEDVDGTDHHKYLWCNAAYAFATKLTGAFDDFGWCAAI
RGVEGGGLVEDLPTHTFKTDEGEVALKCPAEIAITDRREKELSDLGFISLVHCKNTDYAA
FFGAQSAQKAKKYNTDSANANAVLSAQLQYIFAVSRIAHYMKAMMRDKIGSFAAASNVED
HLNRWLTQYVLLDDNASQEQKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSV
SLRLVAELPPSTKS
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtccgctcaactgacccctgcatccggcgccgccgcgacccatgaaacggccctgctc
gaccagatcgtcgaacagagcaaggtggccaaatcgagcgtcgagcacgcccgtgccaag
gacttgatttccgaactcgtgcaccaggtgatggatggcacggtgatcgtatcggacaat
ctgtcggccaccatcgacgcccgcgttgccgaactggaccgcatgatttcggaccagctc
tcggccgtgatgcacgcgcctgagttccagaagctcgaaagcagctggaccggcctgaac
tacctggtgaagaacacctcgaccagcaccacgctcaagatcaagatgttcaacgcgacc
aagcgcgagctggtcaaggacttccagagcgcgctcgaattcgaccagagctcgatgttc
aagaaggtctacgaagaagaattcggcaccttcggcggcgccccgttcggctcgctcctg
ggcgactaccagatcacgcgccagccggaagacatgtatttcgtcgagcagatgtcgcac
atcgccgccgccgcccacgcgcccttcatcacctcggcttcgcccgagctgttcgggctg
gaaagctacagcgaactgggcaagccgcgcgacctggccaagatttttgatacggtcgaa
tacgccaaatggaaatcgttccgcgaatcggaagattcgcgctacgtcggcatcaccctg
ccgcgcttcctgggccgcctgccattccatccggccgatggcgccactacggaaggcttc
aatttcgtcgaagacgtggacggcaccgaccaccacaaatacctgtggtgcaacgcggcc
tatgcgttcgcgaccaagctgaccggcgcgttcgacgacttcggctggtgcgcggcgatc
cgcggcgtcgaaggcggcggcctggtcgaagacttgccgacccataccttcaagaccgac
gaaggcgaagtggcgctcaagtgcccggccgaaatcgccattaccgaccgccgcgaaaaa
gagttgtcggacctgggcttcatctccctggtgcattgcaagaacactgactacgcggcc
tttttcggcgcccagtcggcccagaaagccaaaaaatacaacaccgattcggccaacgcc
aacgcggtgttgtcggcccagctgcagtacatcttcgccgtgtcgcggattgcccactac
atgaaggcaatgatgcgcgacaagatcggcagctttgccgccgcatcgaacgtcgaagac
cacctgaaccgctggctgacccagtacgttttgctggacgataacgcaagccaggaacag
aaagcccagttccccctgcgcgaagcgtcggtgcaagtgtcggaagtgccgggccgtccg
ggcgtgtaccgcgccgtgtcgttcctgcgtccgcacttccagctcgacgagctgtccgtt
tcactccgactggtcgcggagcttccaccatcgaccaaatcgtag

DBGET integrated database retrieval system