Massilia antarctica: IV454_30005
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Entry
IV454_30005 CDS
T08186
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
manc
Massilia antarctica
Pathway
manc03030
DNA replication
manc03430
Mismatch repair
manc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IV454_30005
03430 Mismatch repair
IV454_30005
03440 Homologous recombination
IV454_30005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manc03032
]
IV454_30005
03400 DNA repair and recombination proteins [BR:
manc03400
]
IV454_30005
Enzymes [BR:
manc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IV454_30005
DNA replication proteins [BR:
manc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IV454_30005
DNA repair and recombination proteins [BR:
manc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IV454_30005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_18
AAA_2
AAA_30
AAA_19
DNA_pol3_tau_5
nSTAND3
Glyco_tranf_2_5
TsaE
Mg_chelatase
AAA_assoc_2
AAA_24
AAA_28
Herpes_Helicase
Rad17
Herpes_V23
Motif
Other DBs
NCBI-ProteinID:
QPI49612
LinkDB
All DBs
Position
complement(6838549..6840720)
Genome browser
AA seq
723 aa
AA seq
DB search
MSYQVLARKYRPKNFDTLVGQEHVVRALTHALQTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGPDGNGGITADPCGVCDACTAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILGQEGISFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGEVTLD
AVQGMLGALDQTYLVRLLDALLAQDGADLMAVADEMASRSLSYNGALQDLGTLLHRIALA
QSVPSAVPEDLPELADILRLAAAFDAQEVQLFYQIAVHGRNEIGLAPDEYAGFTMTLLRM
LAFRPGNGGAEGAPPTGSGAARSPTPARAAAAAAAAPARAASAAVASHAVVSAPPPAPRM
PPPPAPVAAAPAPVAAPAASVPAMNSARAAINAALEAARSASRGQTSSPRRPTAMSNQAA
ANAAAAASPQAAPETAPESAPAAPAAPAASKAPPPWEQGEPQAAAPQAAPPPAPPMPEAH
YPEMPDDEPPSWVTEFSDDTAVAQEAPPAAAPRAPARPRPAYVITAVPEIDWDGNWPGLA
AGLALRGVSQQLALQTELVSCVVDGNVTTFNLRVPIDTLRASGNTEKLCAALQERFATTK
IHLEIDIGQVWYTASAEAIAYREECQRVAEETVANDPFVKDVMRDLGAFIVPGSVRPAPS
ASA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgcaaataccgtcccaagaatttcgacacgctcgtcggc
caggagcacgtggtgcgcgcgctgacgcacgccctgcaaaccggccgcctgcaccacgcc
tatctgttcaccggcacccgcggtgtcggcaagacgaccttgtcgcgcatcctggccaag
tcgctcaactgcatcggccctgacggcaacggcggcatcaccgccgacccgtgcggcgtg
tgcgacgcctgcaccgccatcgatgccggccgcttcgtcgactatatcgagatggatgcc
gcatcgaaccgcggcgtcgacgaaatggcgcagctgctggagcaggccgtgtacgccccc
tcgaacgcgcgcttcaaggtctacatgatcgacgaggtgcacatgctgaccaaccacgcc
ttcaactccatgttgaagaccctggaagagccgcccgagcacgtcaagttcatcctggcg
accaccgatccgcaaaaaattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctc
aagcagatgccgccggggcatatcatcagccacctcgataacatcctcggccaggaaggc
atcagcttcgagcagccggccctgcgcctcctggcccagggcgcgcacggttcgatgcgc
gacgcgctctcgctgaccgaccaggccatcgcctacgcggccggcgaagtcacgctcgac
gcggtgcagggcatgctcggcgcgctcgaccagacttacctcgtgcgcctgctcgatgcg
ctgctggcgcaggacggcgccgacctgatggcggtggccgacgaaatggccagccgcagc
ctgtcgtacaacggcgcgctgcaagacctgggtaccttgctgcaccggatcgcgctggcg
caaagcgtgccgtccgccgtgcccgaagacttgcccgaactggccgacatcctgcgtctg
gcggcggctttcgacgcccaggaagtgcagctgttttaccagatcgccgtccacggccgc
aacgagatcggcctggcgcccgacgaatacgccggcttcaccatgaccttgttgcgcatg
ctcgctttccgccccggtaacggtggtgccgaaggcgcgccgccgacaggttccggcgcg
gcccgttcgcccacgccggcgcgcgccgccgctgctgccgccgccgcgccggcacgcgcc
gcatcggccgccgtcgccagccacgccgtggtgagcgcgccgccgccggcgccacgcatg
ccaccgccgccagcgccagtagcggcggcacccgcgccggttgcggcgccggcggccagc
gtaccggccatgaattcggcgcgtgccgcgatcaacgccgccctggaagcggcacgttcg
gccagccgtggccagacctcctcgccgcgccgtccgaccgccatgtcgaatcaggcggcc
gccaacgccgccgccgctgcctcaccgcaggcggccccggaaacagcaccggaatccgca
cccgcggcaccggccgcgccagccgcatcgaaggcgccgccgccgtgggagcagggcgag
ccccaggctgccgcgccccaggccgcaccgccgccagcgccaccgatgcccgaagcgcac
tatcccgagatgccggatgacgagccgccgtcgtgggttaccgaattttccgacgacacc
gccgtcgcacaggaagcgccaccggccgcggccccgcgcgcgcccgcgcggccgcgcccc
gcttacgtcatcaccgctgtgcccgagatcgactgggatggcaactggccgggcctggcc
gccggcctggccttgcgcggcgtgtcgcagcaactggcgctgcaaacggaactggtgtcc
tgtgtggtggacggtaacgtcaccaccttcaacctgcgcgtgccgatcgacaccctgcgc
gccagcggcaataccgaaaaactgtgcgccgcgctgcaggaacgcttcgccacgaccaag
atccacctcgagatcgacatcggccaggtgtggtacacggccagcgccgaagcgatcgcc
taccgcgaagaatgccagcgcgtggccgaggaaaccgtggccaacgacccgttcgtgaaa
gacgtgatgcgcgaccttggcgccttcatcgtgcccggctcggtgcgtcccgccccaagc
gcgtccgcctga
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