Massilia antarctica: IV454_30395
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Entry
IV454_30395 CDS
T08186
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
manc
Massilia antarctica
Pathway
manc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IV454_30395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manc02000
]
IV454_30395
Transporters [BR:
manc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IV454_30395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QPI49681
LinkDB
All DBs
Position
complement(6933437..6936541)
Genome browser
AA seq
1034 aa
AA seq
DB search
MNPSAPFIQRPVATSLLMLAIVLAGFVGFKFLPLSALPQVDFPTIQVQTLYPGASPEVMA
RTVTAPLERRFGQMSGLQRMSSTSASGVSIVTLQFGLGQTLDVAEQEVQAAINAGGSLLP
ADLPAPPVYAKVNPADAPVLTLAITSDTVPLTEVQNLVNTRLALKISQVSGVGLVTLSGG
QRPAVRIQADTGALASHGLGLDTLRSAIAGANANSAKGNFDGPTRSYAINANDQLLTVPD
YEKLIVAYRNGAPVRLSEVAKVVDSAENVKLGAWANMKPAIILNVQRQPGANVIATVDAI
KARLPELQAGLPGALRLDVLSDRTTGIRASVTHVELELLLAVALVVLVIFAFLHSVRATV
IASLAVPISLIGTCGAMYLLGYSLNNLSLMALTIATGFVVDDAIVMIENIARYIEEGETP
MAAAVKGAAQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFREFAITLAITILISAVVSLT
LVPMMSARWLRSHEEEKPGRVAQRTQLFFERVIVRYDHALTWVLARQGLTLLVALATLAL
TAMLYVMIPKGLFPTQDTGQLQARVEMRQSISYDRMAELQQAAGKAILADPDVESLSSNV
GVDAANNTMLHTGRMLINLKHDKASSQAEIMERLRRRVAEVAGITLYLQPTQDLTIDAES
GPTLYRVSLEGADSATVGQWAAALVKHLQQNRQVTNVVTDAGATGVSAFVSIDRDTASRL
SVTAAAIDDALYSAYGQRIVSTIFTETNQYRVILEAQRDAQMSIAALGQLPIKTVSGKTT
PLSAVANITEQPAPLQITHVAQYPATTIGFDTAPGVSLGQSVEAIRTAALEIKLPASVSM
TFLGAAGAYQASLSNQLWLILAAVVCVYIVLGVLYESYIHPLTILSTLPSAGVGALLALM
ISGQDLGVIGIIGIILLIGIVKKNAIMMIDFAIEAEREQGMAPREAIRQAALLRFRPILM
TTLAALFAAVPLMLGWGEGAELRRPLGLAIFGGLIVSQMLTLFTTPVIYLGFDSLARRWP
RKDASAVNAGGVAK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatccgccccgtttatccagcgcccggtcgccacatcgctgctgatgctggcg
atcgtgctggccggctttgtcggcttcaagttcctgccgctgtcggcgctgccgcaggtc
gatttcccgaccatccaggtgcagaccttgtacccgggcgccagtcccgaagtgatggcg
cgcaccgtcacggcgccgctggaacgccgcttcggccagatgtccggcctgcagcgcatg
agttccaccagtgcctccggcgtgtccatcgtcaccctgcagttcggcctggggcaaacg
ctcgacgtggccgagcaggaagtgcaggcggcgatcaatgccggcggctcgctgctgccg
gccgacctgccggcgccgccggtgtacgccaaggtcaacccggccgacgcgccggtactc
accctggccattacctcggacacggtgccgctgaccgaagtgcagaatctggtcaatacg
cgtctggcgctgaaaatcagccaggtgtccggtgtcggcctggtcaccctgagcggcggg
cagcggccggcggtgcgcatccaggccgataccggcgccctggccagccacggccttgga
ctggacaccctgcgcagcgccatcgcgggcgccaacgccaacagcgccaagggcaacttc
gacggtcccacgcgttcttacgcgatcaacgccaacgaccagctgctgaccgtgcccgat
tacgaaaaactgatcgtcgcctaccgcaacggcgctccggtgcgcctgtcggaggtggcc
aaggtggtcgacagcgccgaaaacgtcaagctgggcgcctgggccaacatgaagccggcc
atcatcctcaacgtgcagcgccagcccggcgccaacgtcatcgccacggtggacgccatc
aaggcgcgcctgcccgagctgcaagcgggcctgcccggcgcgctgcggctcgacgtgctg
tcggaccgtaccaccggcatccgcgcatcggtcacccatgtggaactcgaactgctgctg
gccgtggcgctggtggtgctggtgatttttgcgttcctgcacagcgtgcgcgccacggtg
attgccagcctggccgtgccgatctcgctgatcggcacctgcggcgccatgtacctgctc
ggctacagcctgaataacctgtccctcatggcgctgacgattgccaccggcttcgtggtc
gacgacgcaatcgtcatgatcgaaaacatcgcgcgctacatcgaggaaggcgaaacgccg
atggcggccgccgtcaagggcgcggcgcagatcggctttaccatcatttcgctgacggtg
tcgctgattgccgtgctcattccgctgctgttcatgggcgacgtggtggggcgcctgttc
cgcgagttcgccatcaccctggcgatcaccatcctgatttcggccgtggtgtcgctgacc
ctggtgccgatgatgtcggcgcgctggctgcgcagccatgaagaggagaagccgggacgc
gtggcgcaacgcacccagctttttttcgagcgcgtgatcgtccgctacgaccacgccttg
acgtgggtgctggcgcgccagggcctgaccttgctggtcgcgctggccaccctggcgctc
acagccatgctgtatgtgatgattcccaagggcctgttcccgacccaggataccggccag
ctccaggcgagggtggaaatgcgccagtcgatttcctacgaccgcatggccgaactgcag
caggcggcgggcaaggcgatcctggccgatcccgacgtggagtcgctcagttccaacgtc
ggcgtcgacgcggccaacaacaccatgctgcacaccgggcgcatgctgatcaacctgaaa
cacgacaaggcttccagccaggccgagatcatggagcgcctgcgccgccgcgtggccgag
gtggcaggcattaccctgtacctgcaaccgacccaggacctgaccatcgacgccgaaagc
ggcccgaccttgtaccgcgtctcgctcgaaggggccgacagcgccaccgtcggccagtgg
gcggccgccctggtcaagcacctgcagcaaaacaggcaggtaacgaatgtggtgaccgac
gccggcgccaccggtgtctcggcgtttgtgagcatcgaccgcgataccgcctcgcgcctg
tcggtcacggccgccgcgatcgacgacgccctgtacagcgcctacggccagcgtatcgtc
tcgaccatcttcacggagaccaaccagtaccgcgtgatcctggaagcgcagcgcgacgcg
caaatgtcgatcgccgcgctgggccagttgccgatcaagacagtctccggcaagaccacg
ccgctgtcggcggtggccaacatcaccgagcagccggcgccgctgcaaatcacccacgtg
gcgcaatacccggccaccaccattggcttcgacaccgcgccgggtgtctccctgggccag
tcggtcgaggcgatccgcaccgccgccctggagatcaagttgccggcgtcggtcagcatg
accttcctcggtgcggcgggcgcctaccaggcatcgctgtcgaaccagctgtggctcatc
ctggcggcggtggtatgcgtctacattgtgctcggggtgctgtacgaaagctatatccat
ccgctgacgatcctgtccaccctgccgtcggccggcgtgggtgcgctgctggcgctgatg
atcagcggccaggatctgggcgtgatcggcattatcggcatcatcctcctgatcggcatc
gtcaagaagaacgcgatcatgatgatcgacttcgccatcgaggcggaacgggagcagggc
atggccccgcgcgaggcgatccgtcaagccgcactgctgcgctttcgcccgattctaatg
accaccctggccgcgctgttcgcggcggtgccgctcatgctcggctggggcgagggcgcc
gaattgcgccgcccgctgggcctggccatcttcggtggcctgatcgtcagccagatgctc
acgctgtttacgacgccggtgatttacctcggcttcgacagcctggcgcggcgctggccg
cgcaaggacgccagcgccgtcaatgcgggcggggttgccaagtga
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