KEGG   Massilia antarctica: IV454_32055
Entry
IV454_32055       CDS       T08186                                 
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
  KO
K08086  pilus assembly protein FimV
Organism
manc  Massilia antarctica
Brite
KEGG Orthology (KO) [BR:manc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:manc02044]
    IV454_32055
Secretion system [BR:manc02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   IV454_32055
SSDB
Motif
Pfam: TPR_14 TPR_19 LysM TPR_10 TPR_6 Dynamitin
Other DBs
NCBI-ProteinID: QPI49980
LinkDB
Position
complement(7291180..7294026)
AA seq 948 aa
MHLNTRSKLTSFALKTVTGAVASAVFLSTSAYAAGLGKLTVLSALGQPLNAEIELTSVAN
DEASGLVAKLAPAEAFRQANIDFNPALLSLRFNVEQRGGRQFIKITSAQPVNEPFVDMLL
ELNWGSSGRLVREYTFLLDPVEMRSTQTAQVSAPVDVLSQGSRNGAKADAKAGAKAGGKT
GAANAAKPPADAPAEPKADKAEPKAAASQEPQRAAGKGEGDSEYKVKRGDTLGKIAAHIK
PADISLDMMLVALYRANPDAFAGNNMNRLKSGQILSVPEAAAIKGSESEARGVVVAHATD
FNAYRNKLAGQVASGSADKEPEKTQSAAGKITAKVAERPTAANESKDQLKLSKATGATDV
AGKTGALTPEDKIAKEKAMADATKRVKELEKNVGDLEKIMTVKSKTAAGAVAPKTPITEV
VGAKPPVTPPATTPAVVTPPPPAAVPVPPPAAATPAVSAPAVTPAPVAADVPAPAAVPAP
KPVIKPAAPAPAPSFFDMLMDNIVLVIAAIVALLAGLFGLSKWRERKQVERNPSEPSILG
APTDQAHSLFAETGGQSVDTNNSVFNSSFAPSASQLDTNEVDPVAEADVYIAYGRDAQAE
EILKEALRTHPDRYPVRLKLLEIYAARKDQRAFESQASELYGMTKGQGDEWAQAAALGLS
IDAMNPLYASAGSSAPAATSLPADPADQFDASAIDNGPHSALMDLDLDLSKDATATPVAP
APAPVAPVAKAAEEHTLDFDLGGLSFEPVTHAEPVVTPAAEVMDEHHLSFDTPAAAPVHV
EPVKAETPDMDFDMDFNAPAATSTVSLSKAPADDDFNLDGMNFDLPQSTTPGAVPSLAND
DPFAVDTKTAKADAAPEFDMHSLDLDLPAGSKADHTALPDFNDIGSAADVPAGELTPVQM
EMETKLDLAIAYQEIGDKEGARELLDEVIKGGSASQVAKANDMRVKLA
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgcatttaaacactcgctccaagctcacttcgttcgcgttgaaaaccgtcacaggcgcg
gtcgccagtgcggtgtttctgtccacctcagcatacgcggcaggtctcggtaaactgacc
gttctgtccgcgctcggccagcccctgaacgcagagatcgaactgacctcggttgccaat
gacgaagcgagcggcctggtcgccaagctggccccggctgaagccttccgtcaagccaat
atcgatttcaatcctgccctgctgtcgctgcgtttcaacgtcgagcagcgcggtggccgc
cagttcatcaaaatcacttctgcgcagcctgtcaacgaaccgttcgtcgatatgttgctc
gaattgaactggggttcgtcgggccgactggtgcgcgaatacaccttcctgcttgaccct
gtcgaaatgcgttcgacccagaccgcgcaagtatccgcgccggtcgacgtgctgtcgcag
ggtagccgcaacggtgccaaggcggatgcgaaagccggcgccaaggccggcggcaagacg
ggtgcggcaaatgccgccaagccgcctgccgatgcgcctgcggaaccgaaagccgacaag
gccgagccaaaggcagctgcctcgcaagagccgcagcgcgccgccggcaagggcgaaggc
gacagcgagtacaaggtcaagcgtggcgataccttgggcaagatcgcggcccatatcaag
ccggccgatatttcgctcgacatgatgctggtcgcgctgtaccgcgccaatccggatgcc
ttcgcaggcaacaacatgaaccgcctgaaatcgggccagatcctgtcggtgcccgaagcg
gcagcgatcaagggttccgaaagcgaagcgcgcggcgtcgtggtggcccatgccaccgac
ttcaacgcgtaccgcaacaagctggccggccaggtcgccagcggctcggccgacaaggag
cctgaaaaaacccagagcgccgccggcaagatcaccgccaaggtggccgagcgtccaacc
gccgccaatgaatcgaaagaccagctcaaattgtcgaaagcgaccggcgcgaccgacgtc
gccggcaagaccggcgcgctgacgccggaagacaagatcgccaaagaaaaagccatggcc
gacgccaccaagcgcgtcaaggaactggaaaagaacgttggcgatctcgaaaagatcatg
acggtcaagagcaagaccgccgccggtgcagtagcgccgaagacaccgatcacggaagtg
gtcggcgccaagccgccggtgactccgccggccaccacgccagcggtggtcacgccgccg
ccgccagcggccgtgccggtgccgccacctgccgccgccacgccggctgtctccgcgccg
gccgtgacgccagcgccagtggcggccgatgtgccagcgccggccgccgtgcctgcgccg
aaaccggtgatcaagccggctgcgccagcgccagcgccaagcttcttcgacatgctgatg
gataacatcgtgctcgtgatcgctgccatcgtcgccttgctggccggcctgttcggcctg
tcgaaatggcgcgagcgcaagcaggtcgagcgcaatccgtcggagccgtcgatcctcggc
gcgccgaccgaccaggcgcactccctgttcgccgaaaccggcggccagagcgtggacacc
aacaacagcgtgttcaactccagcttcgccccatcggccagccagctcgacaccaatgaa
gtcgatccggtcgccgaagccgacgtctacatcgcctacggccgcgacgcccaggctgaa
gagattctgaaggaagcgctgcgtacccatccagaccgctacccggtccgcctgaaactg
ctggaaatctacgctgcccgcaaggaccagcgcgcgttcgagagccaggccagcgagctg
tatggcatgaccaagggccagggcgacgagtgggcacaagcggccgcactgggcctgtcg
atcgatgcgatgaacccgctgtacgccagcgccggcagcagtgcgccggccgcgaccagc
ctgccggccgatccggccgaccagttcgacgcttcggcaatcgataacggtccgcacagc
gcgctgatggatctcgacctcgacctgagcaaggatgccaccgccacgccagtcgcaccg
gcacctgcaccggtcgcaccagtggccaaggcagccgaagagcacaccctcgacttcgac
ctgggcggcctgagcttcgagccagtgacccatgccgaaccggtggtcacgccggcggcg
gaagtcatggacgagcatcacctgtcgttcgacacgccagcggcagcgccggtccacgtc
gagccggtgaaggcggagacgccggacatggacttcgacatggacttcaacgcaccggcg
gccaccagcacggtgagcctgtcgaaggcgccggcggacgacgatttcaacctcgacggc
atgaacttcgacctgccgcaatcgaccacgccgggcgccgtgcctagcctggcgaacgac
gatccgtttgccgtcgataccaagaccgccaaggctgacgccgcgccggagttcgacatg
cactcgctcgacctcgacctgccggcaggcagcaaagccgaccacaccgcactgccggac
ttcaacgacatcggcagcgccgctgacgtgccggccggtgaactgacgccggtccagatg
gagatggaaaccaagcttgacctggccatcgcctatcaggaaatcggcgacaaggaaggt
gcgcgcgaactgctcgacgaagtcatcaagggcggcagcgcttcccaggtggccaaggcg
aacgacatgcgcgtcaagctggcttga

DBGET integrated database retrieval system