Mangrovimonas sp. YM274: RBH95_03020
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Entry
RBH95_03020 CDS
T09317
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03030
DNA replication
mang03430
Mismatch repair
mang03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH95_03020 (dnaE)
03430 Mismatch repair
RBH95_03020 (dnaE)
03440 Homologous recombination
RBH95_03020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mang03032
]
RBH95_03020 (dnaE)
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_03020 (dnaE)
Enzymes [BR:
mang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH95_03020 (dnaE)
DNA replication proteins [BR:
mang03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBH95_03020 (dnaE)
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBH95_03020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MCM10_OB
Peptidase_M60_C
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
WMI69355
LinkDB
All DBs
Position
673925..678313
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPISDTDNWPRAIQIAWQLHDELGRCVEHQDFLIQPEGFNIPY
DAEKVHGISTELAQEQGIPLGEVLEKFNAALSKTKFVVGQNVGFDVNIMGAEFYRESVAN
ALQELPVLDTCTEHTAELCQIPGGRGGKFKLPTLTELHQYLFNQPFAEAHNATADVEATT
RCFFELVRRQEFTIEALDVEPGYFNRFSEANPGEIQLIGLKHINLKKASDAIRKRLEKQQ
APDITEAEIQQNISELEDASFAHLHNHSQFSVLQSTISIPDLVAAAAKNNMPGVALTDHA
NMMGAFHFVRAVLNHNKGVKAKNEEAIAAGGEAKLKEIKPIVGCEFFVCEDRLDKSRKDN
GYQIVMLAKNKRGYHNLAKLSSIAFTEGFYYVPRIDKEIIKQYKEDVIVLTGNLYGEVPS
KVLNVGENQAEEALLWWKDMFQDDLYVEIMRHNQEDENRVNPVLMDLAKKHDVKVIATNN
TYYVDQKDANAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEYYFKSADEMKSLFKDIPE
AISNIQEILDKVEPYDLARDVLLPKFDIPERFQHEEDLEDGGKRGENAYLRHLTYEGAKG
RYEEITPSIAERLDFELDVIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIGKYGSSQVAQIIT
YGTMAAKSSIRDTARVLDLPLFEADRIAKLIPNMTKLNKIFGLDEKGLKAKFKSEEIELI
QELFNISEGAGLESDTVNMAKILEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIELDPENFPLDDQMTYELFQR
GETVGVFQYESPGMQKHMQSLKPTVFDDLIAMNALYRPGPMEYIPDFIARKHGDQEIVYD
LPAMEEYLQETYGITVYQEQVMLLSQKLANFSKGDADMLRKAMGKKIFALLEKLKPQFLD
GGEANGHPRKVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMKLNVLGPDVNESFYKFSVNDQNAVRFGMGAIKGVGHGAVKTI
VDNRKKDGFYKSIFDLAKRIDLRAANKKAFENLALAGGFDCFSGTHRAQYFHDEGDGITF
LEKAIKYGNKHQENENSAQVSLFGEASDVQIDEPVVPPCEEWGTMEKLAREKEVVGIYIS
GHPLDDFKIEMKTFCNATLAALTQIDQFVNRELTVGGVVTDVQHRVSKQGKGWAMFTMDD
YNNSVEFRIFGEEYLKFRHFLVQNSFVYVKVFIREGWIINKDTGQRGEPRMQFNYFQLLH
DVMETYARKLSIQLNIADLGDDKIEVLRNLIGMHSGEKALNFTVYDNEEQIKLEMISRRQ
KVRISQELLKALEHQNILYKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgataccgaaacaaccggtttacccaagcgttgggacgcccctatt
tcagataccgataactggccacgagcaattcagattgcttggcagttgcatgacgaattg
ggacgctgtgtagaacatcaggattttttgatacaaccggaggggtttaatattccttat
gatgcggagaaggtccatggtatttctacagagttggcacaagagcaagggattccttta
ggtgaggtattggaaaagttcaatgcagctttgtccaaaaccaaatttgttgttggacag
aatgttggcttcgatgtcaatattatgggggctgagttctatcgtgaaagtgttgccaat
gcattgcaggaattaccggtattggatacctgtacggaacatactgcagaattgtgtcaa
attccaggaggacgtggtggcaaatttaagttgcctaccttaacagagttacaccagtac
ctgttcaaccagccgtttgcggaagcgcacaacgccactgccgatgtggaggctacgacg
cgctgtttcttcgaattggtgcgccgtcaagaatttacaattgaagcccttgatgttgag
cctggatatttcaataggttcagtgaagccaatccaggcgaaattcaattaataggctta
aagcacatcaacctaaaaaaggcgagtgatgctataagaaagcgcttagaaaagcaacag
gctccagatattaccgaagctgaaattcagcaaaacatatcggaacttgaggatgctagt
tttgcccatttgcataaccattcccagttctcggtcttgcagtctactattagcattcca
gatttggtggctgctgcggcaaaaaacaatatgcctggtgtggccttgacggaccatgct
aatatgatgggagcttttcactttgtgcgtgcggtattgaatcacaataaaggtgttaag
gctaaaaatgaagaagcgattgcggcaggaggtgaagccaaattaaaggaaatcaaacct
attgtgggttgtgaattctttgtgtgtgaggatcgattggataaaagtcgaaaggacaac
gggtatcaaatagtcatgttggccaagaataaaaggggatatcacaatttggccaaattg
tcctctattgcctttacagaagggttctattatgtcccgcgtatagataaggaaatcatc
aagcaatacaaggaagatgtaattgtcttgaccggaaacctttatggggaagtacctagt
aaggtgttgaacgttggtgaaaatcaggcagaggaagcgctgttgtggtggaaggacatg
tttcaggatgatttgtatgtagaaatcatgcgccacaatcaggaagatgaaaaccgcgtg
aatccggtgttgatggatttggcaaaaaagcatgatgttaaggtaattgccacaaacaat
acttattatgtagatcaaaaagatgccaatgcacacgatattttgttgtgtgttaaggat
ggggaaaagcaaagcacaccaattggtagaggccgtggctatcgctacggactgccaaat
caagaatattatttcaagtcggccgatgaaatgaaatccttgttcaaggacattccagaa
gccatttccaatattcaggaaattttagataaggtagagccttatgacctagcgagggat
gtcctcttgccgaagtttgatattcctgagcgatttcagcatgaagaggatttagaggac
gggggaaaacgcggagagaatgcctacttaaggcatttgacttatgaaggagccaagggg
cgctacgaagaaattaccccttccatcgctgaacgtttggactttgagctggacgttatt
gaaaaaacgggatacccgggttacttcttgattgtagaagactttatccgggaagctcgg
aatatggatgtatcggtagggccaggtcgaggttcggcagcgggatctgccgttgcctac
tgtttgggaattaccaatatcgatcctattaagtacgatttgctttttgagagattcttg
aatccggatcgtgtaagtatgcccgatattgatatcgattttgatgacgaggggcgtagc
cgtgttatggattatgtaattggtaaatatggtagcagtcaggtagctcagattattacc
tatggtacgatggcagctaagtcatccattagggatacggcaagggtgttggacttacct
ttatttgaagccgataggattgccaagttaatcccgaacatgaccaaactgaacaagatt
tttggtttggatgaaaagggattgaaggcgaagttcaaatccgaagagatagaattaata
caagaacttttcaatatttcggaaggggcaggtttagagtcggatactgtaaacatggcc
aagattttggaaggttctgttcgaaatacaggaatccatgcctgtggggtcatcattacc
ccggatgatattaccaagttcgtgccggtgtccttagccaaggattccgatttgtatgta
acgcagtttgataactcggtagtagaatctgcaggtctgttaaaaatggatttcttgggg
ttgaaaacattgaccctgattaaggataccgtaaagattgtaaaggcgaagcatggcatt
gagctggatcctgagaatttccctctggatgaccaaatgacctatgagctgttccaacgc
ggtgaaacagttggggtgttccaatacgaatcgcctgggatgcaaaaacacatgcagtcc
ttaaagccaactgtgtttgatgaccttattgccatgaacgcattgtaccgtccgggacca
atggaatacattccagactttattgcgcgtaagcatggagatcaggaaattgtttacgat
ttaccggccatggaggagtaccttcaggaaacctacggaattacggtttatcaagagcag
gtaatgttgctgtcgcaaaaattggccaacttctccaagggtgatgctgatatgcttcgt
aaggcgatgggtaaaaagatttttgctttgcttgaaaaattgaagcctcagtttttggac
ggaggggaagccaatgggcacccgcgtaaggtgttggaaaagatttggaaggactgggaa
gcgtttgcgagttacgccttcaataaatcccactctacctgttatgcttggattgcctat
caaacagcatatttaaaggcacactatcctgcggaatatatggcagcagtactgtcaaat
aacatgaatgacatcaagcaggtaaccttcttcatggaagagtgtaagcggatgaagcta
aatgttcttgggccagatgttaatgaatccttttataaattctctgtaaacgatcaaaat
gcggtacgttttggtatgggagctattaaaggagtgggacatggtgccgtgaaaaccatt
gttgataatagaaagaaagacggtttttataagtctatcttcgatttggccaaacgtatc
gatttaagggcggccaacaaaaaggcttttgagaacttggccttggctggtgggttcgat
tgtttttcgggaacccatcgtgcgcaatatttccatgacgaaggtgatggcatcactttc
ttggaaaaggccataaaatatgggaataaacatcaggaaaatgagaattctgcacaggta
agtctctttggggaggccagtgatgtgcagattgatgagcctgttgtgccaccttgtgag
gaatgggggactatggaaaaattggcaagagagaaggaagtggtgggaatttatatttct
ggacatccgttggatgacttcaaaatagaaatgaaaaccttctgtaatgccaccttggcg
gcgttaacccaaatagaccagtttgtgaatcgggaattgaccgttggaggtgtcgtgacc
gatgtacagcaccgagtaagtaagcagggaaaaggttgggctatgttcaccatggacgat
tataacaatagtgttgaatttaggatatttggggaggaatacttgaaattccgtcacttt
ttggtacagaactcttttgtgtatgtaaaagtatttattcgcgaaggatggatcatcaat
aaggacacggggcagcgcggggaacccagaatgcagtttaactatttccagttgttgcac
gatgttatggaaacctatgcaagaaagttgtccattcagcttaatattgccgatcttggt
gatgacaaaatagaggtattaagaaatttaattgggatgcactcaggagaaaaggcttta
aattttacggtttatgataatgaggagcagattaaactggaaatgataagccgaagacag
aaggtgaggatctcgcaagaactgttaaaggctctggagcatcaaaacattctttataag
ctgaactag
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