Mangrovimonas sp. YM274: RBH95_03115
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Entry
RBH95_03115 CDS
T09317
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03030
DNA replication
mang03410
Base excision repair
mang03420
Nucleotide excision repair
mang03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBH95_03115 (polA)
03410 Base excision repair
RBH95_03115 (polA)
03420 Nucleotide excision repair
RBH95_03115 (polA)
03440 Homologous recombination
RBH95_03115 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mang03032
]
RBH95_03115 (polA)
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_03115 (polA)
Enzymes [BR:
mang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBH95_03115 (polA)
DNA replication proteins [BR:
mang03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBH95_03115 (polA)
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBH95_03115 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBH95_03115 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WMI69373
LinkDB
All DBs
Position
complement(698250..701090)
Genome browser
AA seq
946 aa
AA seq
DB search
MSAPKRLFLVDAYALIFRGYYAFIKNPRINSKGVDTSAILGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVEMFEAYKANRDETPEAIRIAVPYIHDILKSMHIPIMEKEGYEADDIIGT
LSKQAEKQGYQTFMVTPDKDFAQLVSDNIFMYRPVFGGGYETWGIPEVKDKFEVEDPLQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLKQFGSMEKLLDSTHELKGKMKEKIEANKELG
LMSKKLATIILDVPVEFCETDFEMSEPDIEGVKAIFQELEFRRLIDNFVKTFAPQEDTAS
ADGQTEGKTSSETSSKQTTAGAGQFSLFGDNSNAPTTTTEFTRNTSISTSHFYQSTNSPL
AIKLLIKNLMQQTSVCFDTETTSINPLTAELVGIAFSWEVGKGFYVPFPEDRGEAQTLIE
QFREFFESDTIEKIGQNLKYDIKVLAKYNIQVKGKLFDTMLAHYLINPDMRHNMDVLAET
YLNYTPISIESLIGKKGKNQLSMRQVALDKQTEYAVEDADITLQLKEHFAKELGAANTQA
LFDDIEVPLLRVLAAMELEGINLDQDFLKQLSEALNKDIADLEQKIYTEAGEEFNIASPK
QLGDILFDKLKLVDKPKKTKTGQYATSEDILSYLAKDHEIIQHILDFRGLSKLKSTYVDA
LPQQVEPSTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNEDYTLL
AADYSQIELRIIAALSKEETMINAFKHGEDIHASTASKVFNVPIEEVTREQRSNAKTVNF
GIIYGVSAFGLSNQTDLSRSEAKELIDTYYATYPKLKSYISEQVDFARDHGYVQTVLGRR
RYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIYKKLEEGNYKTKMLLQVHD
ELVFDVYKPELETIKTLVKTEMESAYTLEVPLDVELDTGDNWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacctaaacgtctttttttagtcgatgcctacgcccttatttttagagggtac
tatgcttttatcaaaaaccccagaatcaattcaaaaggagtagacacctctgcaatccta
ggctttatgaattccttattggatgtcatcaaacgggaacgcccagaccacttggccgta
tgttttgataaaggtggtagtgccgaccgtgttgaaatgtttgaagcctacaaagctaac
cgtgacgaaactcctgaagccattagaattgcagtgccttatatacatgacattcttaaa
tccatgcatattcccatcatggagaaagaaggctatgaagccgatgatattataggaact
ctttccaaacaagccgaaaaacaaggctaccaaacgtttatggtaaccccagataaagac
tttgctcaattggtatcggacaatatttttatgtaccgtcccgtatttggcggcggttat
gaaacttggggcatccctgaggtaaaggataaatttgaagtagaagacccgcttcaggtc
attgactttttaggaatgatgggagattcttcagacaatatcccagggcttcccggtgtt
ggagaaaaaacagccaagaagtttttaaaacagtttggcagcatggaaaagctcttggac
agcacccacgagcttaaaggaaaaatgaaggaaaaaattgaggcgaacaaagaactgggc
ttaatgtcgaaaaaactagcaaccatcatactggatgttcctgttgaattttgtgagacc
gattttgaaatgtccgaacccgacattgagggtgttaaagctattttccaagaactggaa
tttagaagacttatcgacaattttgtaaagacttttgctccccaagaagacaccgcttct
gctgacggccaaacagaaggcaagacttcctctgaaacctcatccaaacaaactacggct
ggagcaggtcaattttctctttttggtgacaactccaatgctcctactacaaccacagaa
tttactagaaacacatcaatctctacctctcacttttaccaaagcaccaatagtcctttg
gccataaagttattaatcaaaaacttgatgcaacaaacttcagtatgtttcgataccgaa
actaccagcatcaatcctttgacggcagagttggtgggaatagcattttcatgggaagta
ggtaaaggcttttatgtaccttttccggaagaccgaggtgaagcccaaacattgattgaa
cagttccgagagttttttgaaagtgacactattgaaaaaataggacagaaccttaaatac
gacattaaggttttggccaaatacaacatacaggtaaaaggcaaactgttcgataccatg
ttggcacattacctcatcaacccagacatgcgtcacaacatggacgtgttggcagaaacc
tatcttaactacacccctatttccattgaaagtcttataggaaaaaagggaaagaaccaa
ttatccatgcgccaggtagctttggacaaacaaaccgaatatgctgtagaagatgccgat
attaccctgcaactaaaagaacacttcgccaaagaattaggagctgctaacacgcaagcc
ctcttcgatgacattgaagtgccacttttacgagttttggccgccatggaattggaaggc
attaacctagaccaagattttctgaagcaactttcggaagctcttaataaggacatcgct
gatcttgaacaaaaaatatacacagaagctggagaagaattcaacattgcttctccaaaa
caattgggagacattctatttgataagttaaaattggtagacaaacctaaaaaaaccaaa
acaggtcagtatgccacttccgaagatattttgtcttatctcgccaaagaccatgaaatc
attcaacatattttggattttcgcggcctaagcaaattaaaaagcacctatgtagatgcc
ctgcctcaacaggtagaaccttccacgggaagagtgcatacggattatatgcaaaccgta
gccgccactggacgcttaagtagcaacaaccccaatctacaaaacattccaatccgtacc
gagcgcggaaggcaggttcgaaaagcctttattccacgcaatgaagactatacccttctg
gctgctgattattctcaaatagaattgcgaatcattgcggctttaagcaaagaagaaacc
atgatcaacgcttttaaacatggtgaagatattcacgcttccacagcttcaaaagtcttt
aatgtacctattgaggaagtaaccagagaacaacgtagcaatgcaaaaactgtcaacttt
ggaataatttatggcgtgtcggcctttggactgagcaaccaaaccgatctttctagaagc
gaagccaaggaacttattgacacctattatgctacctatcctaaattaaaaagctacata
agcgaacaagttgattttgctagggaccatggctatgtacaaaccgttttagggagacgc
cgctacctaaaggacatcaattcaagaaatgctgtagtgcgtggcgcagccgaacgtaat
gctgtgaatgcccctatacaaggcagtgctgccgacattattaaaattgctatgattaat
atttacaagaaattggaagaaggcaattataaaacaaaaatgttgctacaagtacatgat
gaattggtatttgatgtttacaaaccagaattggaaaccattaaaaccttggtaaaaaca
gaaatggaaagtgcctacactctagaagtcccgttggatgtagagctggatactggagat
aactggctggaagcccattaa
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