Mangrovimonas sp. YM274: RBH95_07015
Help
Entry
RBH95_07015 CDS
T09317
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBH95_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mang03019
]
RBH95_07015
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_07015
Enzymes [BR:
mang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBH95_07015
Messenger RNA biogenesis [BR:
mang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBH95_07015
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBH95_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SNF2-rel_dom
Peptidase_C74
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
WMI70092
LinkDB
All DBs
Position
complement(1604153..1606060)
Genome browser
AA seq
635 aa
AA seq
DB search
MHPIQVLERYYNHTSFRPLQEDIINAVLENEDTFALLPTGGGKSVCFQIPAIIKKGICIV
VSPLVALMKDQVNNLNEKGIKAMAITSGLSAERLDTLLDNCIYGNYKFLYLSPERLQQSL
VQDRIQQMNVNLIAVDEAHCISQWGNDFRPAYKNINVLRRLHPTVNMIALTATAKPDVVE
DIMKELDFISPKVFRASFYRPNIAYIVVEAEDKLYKLEQILKKHQGASIIYARNRKSTIE
ISQYLSQKGFASTFFHGGLNSDEKQDRLYAWTHNQTPIMVATTAFGMGIDKPDVKTVIHI
NLPESLESYYQEAGRAGRNEKKAFAVILKSKADEQQLHNQFLKTLPSIDFIKLVYRKLCN
YFQVSYGEGVNSVFQFNFIDFCKAYEFNTTLAYNVLQLLDRNSVIYLSQQFNQQSKVQFI
ISNQALFHYLDTHSDLSIIVKSILRTYGGIFEHLLKINTKLVANKASLPEAVIIKALEQL
QRDEIITFQHSNTDSELTFIQPREDDKTINRISKIILQQHKLRQDQITSVINYTNNDGIC
KSVQLLKYFGESDVKDCGICSVCISKEKQKRPANTDLKSIKNAIITALETEPLSSRDLAN
MLPYEEHVILNVLKLMLEHHIINITPTNTYKLTHT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctattcaagttttagaacggtattacaatcatacctcctttagaccacttcag
gaggacatcatcaatgcggtgcttgaaaatgaagacacctttgctctactacccacaggg
ggcggaaaatcggtgtgctttcaaattccagctattatcaaaaaaggaatctgcattgta
gtgtctcccttagtggcccttatgaaggatcaggtgaataacctcaacgaaaaaggcatc
aaagccatggccatcaccagcggccttagtgctgaacgattagatacacttttggacaat
tgcatttacgggaattataaattcctgtacctctctccggaacggcttcagcaaagtttg
gttcaggataggattcaacaaatgaatgtcaatcttatcgcggtagatgaagcccattgt
atttcgcaatggggaaacgactttaggcctgcttataaaaacattaatgttttaagacgt
ctgcaccccacagtgaacatgattgcccttaccgcaacggccaaacccgatgtggtagag
gatatcatgaaggagctcgactttatttcacccaaggtattccgagcctccttttacaga
ccaaacattgcctatattgtggttgaggccgaagacaagctctataaactggaacaaatc
ctaaaaaagcatcagggcgcttctattatctacgccagaaatagaaaatctacgattgaa
ataagtcagtatctgtctcaaaagggctttgcaagcacgttttttcacggtgggcttaac
agcgatgaaaaacaagaccgcttatatgcctggacccacaaccaaacccccattatggtg
gcgactacagcttttggaatggggattgacaaaccagatgtaaaaacggtgattcacatc
aatttgcccgaaagtttggaaagctattaccaggaagccggtagagcaggtagaaatgaa
aaaaaggcctttgctgtcatcttaaaaagtaaagcagacgagcaacagctacacaaccaa
tttttgaaaaccctccccagtatagatttcatcaaattggtttacagaaagctatgtaat
tactttcaggtatcttacggcgagggtgttaacagtgtatttcaattcaattttatagac
ttttgcaaggcctatgaattcaacactacacttgcttataatgtgttgcagttgttggac
cgaaacagtgtgatatatctatcacaacaattcaaccaacaaagcaaggtgcaattcatt
attagcaaccaagcactttttcattatttggacactcatagtgacttgtctattattgtg
aaatcaatccttagaacctacggaggtatctttgaacatttactgaaaataaatacgaaa
ctggttgccaataaagcaagtttgccagaagctgtcattattaaagctctggaacagctg
caaagggatgaaattatcacttttcaacattccaatacagattctgaacttacattcata
cagccaagagaagatgacaaaaccatcaaccggatttcaaagatcatcttgcaacaacac
aaattaaggcaagatcaaatcacttcggttatcaactataccaacaatgatggcatttgt
aaaagcgtacaattgctaaaatattttggagaaagcgatgttaaggactgtggtatttgt
tcggtatgcatttccaaagaaaaacaaaaaaggccagcaaatacagaccttaaaagcatt
aaaaatgccattattaccgctttagaaactgaacctttatcctcaagagatttagccaac
atgctcccgtacgaagaacatgttattttaaacgttttaaaacttatgttggaacatcac
ataattaatattacacccacaaacacctataaattaacacacacatga
DBGET
integrated database retrieval system
