Mangrovimonas sp. YM274: RBH95_07620
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Entry
RBH95_07620 CDS
T09317
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03420
Nucleotide excision repair
mang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBH95_07620
03430 Mismatch repair
RBH95_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_07620
Enzymes [BR:
mang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBH95_07620
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBH95_07620
MMR (mismatch excision repair)
Other MMR factors
RBH95_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
AAA_11
ARM_5
Motif
Other DBs
NCBI-ProteinID:
WMI70209
LinkDB
All DBs
Position
1733160..1735478
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AA seq
772 aa
AA seq
DB search
MEKYLSQLNEAQLAPTIQKDGPMIVIAGAGSGKTRVLTYRIAYLMSQGVDPFNILSLTFT
NKAAREMKERIATIVGQSEAKNLWMGTFHSIFAKILRFEADRLGYPSNFTIYDAQDSDKL
IGSIIREMGLDKDVYKAKQIRSRISSYKNNLITVKAYFNNPELRESDAAARRPKMGEIYR
NYVERCFKAGAMDFDDLLLKTNELLTRFPDVLAKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDGVKMFRLEQNYRSTKNIVNAANS
IIDKNQTKLDKVVWTANDEGGKIKVNRLMTDGDEGRYVASSIFENKMNEQLKNSDFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDILSYLRLVINPSDEEALKRVINFP
PRGIGQTTVDRLLVAANGYKRSMFEVMQNLDKVDLKINSGTKGKLRDFVLMLESFQVMNQ
TANAFELAEHITKVTGLIKEFNKDGTPEGVAKMENIEELLNGIKDFVEGQKELADATGSL
TEFLEDVALATDMDKDNEDDDKVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSSNSRSD
LEEERRLFYVALTRAEKQAYLTYTVSRYRWGKLIDAEPSRFIEEIDEQYLEVLTPVQEQR
FNPMLDADIFGDVPPNKVRFKKPPIKKKMEKTPPKFVPPAKLKPMAKAKESEVTNLFDGE
LGVGNIVEHMRFGKGEVLKIEGQGADTKAEINFEIGGVKKLLLRFAKLKVLG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttggagaagtatttaagtcagctgaatgaagcgcagttagccccaaccattcaaaaggat
gggcctatgatagtgattgcaggagcgggatctggcaaaacccgagtgctaacctatagg
attgcctatttaatgagtcagggggtagatcctttcaatatattgtccttgacgtttacc
aacaaggcagcgcgcgagatgaaagagcgtattgcaactattgtaggacaaagtgaggcc
aaaaacctttggatgggaacattccactccatatttgccaaaattctacgttttgaagct
gatagattggggtatccaagtaatttcactatttatgatgctcaggattctgataaactg
attggttccattataagggaaatgggattggataaagatgtctataaggccaaacagatt
cgttccagaatttcttcttataaaaacaaccttattacggttaaggcctattttaataat
ccagagcttcgggagtccgatgctgctgcaagaagacctaaaatgggagaaatctataga
aattatgtagaacgctgttttaaggcgggcgctatggattttgatgatttgttgttaaaa
accaatgagcttttaaccaggtttcctgatgtgttggctaagtatcaagatagattccgt
tatattttggtagatgagtaccaagataccaaccactcacagtatttgatagtaagagcc
ttgtctgatcgtttccaaaatatctgtgtggttggtgatgatgcccagagtatctatgct
tttaggggcgccaacatcaacaacattttaaacttccagaaggattatgacggtgtgaaa
atgttccgtttggaacagaactaccgttccacaaaaaatatcgttaacgccgccaattcc
atcatcgataaaaaccaaacaaaattggataaagtagtttggacagccaatgatgaaggg
gggaaaattaaggtcaaccgtttaatgacggacggtgacgaagggcgttacgtggcgagt
tctatttttgaaaataaaatgaatgaacagcttaaaaacagtgatttcgccattttatat
cgtaccaatgcacagtccagagcgatggaggacgccttgagaaaacgtgatatcccttat
cgtatttatggaggcctgtctttctatcaacgtaaagaaattaaggatatcctttcgtat
ttaagattggtaatcaatccttccgatgaggaagctttaaaaagagtcatcaatttcccg
ccaaggggaattggtcaaaccaccgtcgatcggttattggtagcggccaacggttataag
cgttctatgtttgaggtgatgcaaaacctagataaggttgatttgaaaatcaactcagga
actaaagggaaattgcgtgatttcgttttaatgctggagagttttcaggtgatgaaccaa
actgctaatgcctttgaattggcagagcatattaccaaggtaacaggattaattaaggag
ttcaataaggatggcacaccagaaggggttgccaaaatggaaaatattgaggagctcttg
aacggtattaaggatttcgtagaaggtcaaaaggagttggctgatgcaacgggatcgtta
accgagtttttggaagatgttgctttggcaaccgatatggataaggataacgaggacgat
gacaaagtcgctttgatgaccattcacttggcaaaaggactggaattcccttatgtgtac
attgtgggaatggaggaagatttgtttccaagtgctatgagttcaaattccagaagtgat
ttggaagaagaacgccgtttgttttatgtagcattaacgcgcgctgaaaaacaagcctat
ttaacttatacagtttctcgttaccgttggggaaaattgatagatgcagagcctagtagg
tttattgaagaaattgatgagcaatatttggaggtcttaacgccggttcaagagcagcgt
ttcaatcctatgttggatgctgatatttttggagacgtaccgcctaataaagtaaggttt
aagaagcctccaataaaaaagaaaatggagaaaacaccgcctaaatttgtaccgcctgcg
aaattaaaaccaatggccaaagcaaaagagagcgaggtaaccaatctatttgatggcgaa
cttggcgtaggcaatattgtagagcacatgcgatttggaaaaggagaggtgctcaaaatt
gaggggcaaggagccgataccaaagcggaaatcaattttgaaataggaggcgttaaaaaa
ctattgttgcgttttgctaaactaaaggtgttaggatag
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