Mangrovimonas sp. YM274: RBH95_12430
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Entry
RBH95_12430 CDS
T09317
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mang
Mangrovimonas sp. YM274
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mang03032
]
RBH95_12430 (gyrB)
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_12430 (gyrB)
Enzymes [BR:
mang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBH95_12430 (gyrB)
DNA replication proteins [BR:
mang03032
]
Prokaryotic type
DNA Topoisomerases
RBH95_12430 (gyrB)
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBH95_12430 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WMI67945
LinkDB
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Position
complement(2882363..2884303)
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AA seq
646 aa
AA seq
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MKEEFNKHNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHC
NKITVIINEDNSITCEDDGRGIPVDIHKKEGISALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSEHLKATVYRDGKIWEQEYERGKSLYPVKTIGETELRGTVVTFKPDPTIF
QQTLEYSYDTLASRMRELAYLNKGITIHLLDKRNKDEKGEYIGETFHSENGLKEFITYLD
GNREPLMKEAIAFEGEKNGVPVEVAMIYNTSYAENLHSYVNNINTHEGGTHLSGFRRGLT
HTLKKYADESGMLDKLKFDIAGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVSASVS
QAVSEMLTDYLEEHPEDAKTIVEKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDC
SEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHKVFENEEIKNI
FTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADIDGSHIATLILTFFFRYMKELIENGH
IYIATPPLYLVKKGNKKQYAWNDKERDTIAEEFGGSVNVQRYKGLGEMNAEQLWDTTMNP
EFRTLRQVNIDNGSEADRIFSMLMGDEVPPRREFIEKNAIYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaattcaacaagcacaattattcggcggatagtatccaggcgcttgaaggg
atggagcacgtacgtatgcgtccgtccatgtatattggtgatgtaggagtacgagggttg
caccacttggtttatgaggtggtcgacaactctatcgatgaagctcttgcgggtcactgt
aacaaaattacggttattatcaatgaagataattccattacttgtgaggacgacgggcgt
ggtattcctgtagatattcacaagaaagaaggaatttcagccttggaagttgtaatgact
aaaattggtgctgggggaaaattcgataaagattcctataaagtttcgggaggtctgcac
ggggtaggtgtgagttgtgtgaatgccttgtctgagcatttaaaagctactgtgtataga
gatggtaaaatttgggaacaggaatacgaaagaggaaaatctttataccctgtaaaaacc
attggggaaacagagcttagaggtacggtggttacatttaaaccggaccctaccattttc
caacaaactttagaatatagttacgataccttggcaagtagaatgcgtgaattggcatac
ttgaacaaggggattacaattcacctgttggataagagaaacaaggatgaaaaaggagaa
tatataggcgaaaccttccattctgaaaacgggttgaaggaattcattacctatttggat
ggaaaccgcgaacctttaatgaaggaggccattgcctttgaaggcgagaaaaatggtgtg
ccagttgaggtagccatgatctacaatacttcttatgctgaaaatttacattcgtatgta
aacaatattaatactcacgaaggagggacacacttatctggttttagaagaggattgacc
cataccctgaaaaagtatgctgatgaatctggaatgttggataaattgaaatttgacatt
gccggagatgacttccgtgaagggttaactgcaattatttcggtaaaagtggctgagcct
cagtttgaaggacagaccaagactaagttaggaaacagagaagtgtctgccagtgtaagc
caggctgtttctgaaatgctaacagattatttggaagagcatcctgaagatgctaaaaca
atcgttgaaaaagttattctagctgctcaagctcgtcacgcggcgcaaaaggcccgtgag
atggtgcaacgtaaaacggtgatgagcattgggggacttcctgggaaattaagtgattgt
tcagagcaagatccagcaaaatgtgaagtgttccttgttgagggggattcggcaggagga
actgccaagcaaggtcgtgatagagcgtttcaagctattttgccactgaggggtaaaatc
ttgaacgtggaaaaagcgatgactcacaaggtgtttgaaaatgaagaaatcaaaaacatc
tttacagcacttggagtaactattggaaccgaagaggatagtaaagccttgaacctttca
aaattaagatatcataaaattgtgatcatgtgtgatgccgatattgatggtagccacatt
gcaaccttgattttgaccttcttctttagatatatgaaagagttgattgaaaatggtcat
atctacatagcaacgccgccactttacttagtgaagaaaggaaacaaaaagcagtatgca
tggaacgataaggaacgtgataccatcgcagaagaatttggtggaagcgtaaatgtacag
cgttacaaaggtcttggagagatgaacgcagaacagctttgggacacaaccatgaaccct
gagtttagaaccttacgtcaagtgaatatagacaacggtagtgaggccgatcgtattttc
tcaatgttgatgggagatgaggtgccgccacgtagagaattcattgaaaagaatgctatt
tacgcaaacatcgacgcgtaa
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