Mangrovimonas sp. YM274: RBH95_12610
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Entry
RBH95_12610 CDS
T09317
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBH95_12610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mang03021
]
RBH95_12610
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_12610
Enzymes [BR:
mang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBH95_12610
Transcription machinery [BR:
mang03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBH95_12610
DNA repair and recombination proteins [BR:
mang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBH95_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
DUF3189
Motif
Other DBs
NCBI-ProteinID:
WMI67981
LinkDB
All DBs
Position
complement(2922907..2923899)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVKIE
TVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIDEIDNEAVSISISGQEQITAGDFQKFIS
GFQVLNKDLVICNLDPKVNINMEITIEKGRGYVPAEENKKASAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVIVKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattttcagaagcctgacaaagtaatcatgattgattctactgatttt
gaaggtaaatttgagtttagacctttagaaccaggatatggattgacagtaggtaacgct
ttaagacgagtgttattatcttctttggaaggatttgccattacatctgtaaaaatagaa
accgtggatcacgagttttctaccattgcaggagtagtggaagatgttacagaaattatt
ttgaacttaaagcaggttcgcttcaagcgccaaattgatgaaatcgataacgaagctgtt
tctatttctatttctggacaagagcaaatcacagcaggtgatttccaaaagttcatttcc
ggtttccaagtgttgaacaaagatcttgtgatctgtaacttggatcctaaagtgaacatc
aacatggaaattactattgaaaaaggtagaggatatgtacctgctgaggaaaacaaaaaa
gcttctgctccaattggtactatatttaccgattcaatttatacgccaataaaaaatgtg
aagtatagtattgaaaactatcgtgttgagcaaaagaccgattacgaaaagttggttttt
gaaatcattacagatggatcaatacacccaaaagatgctttaacagaagctgccaaaatc
cttattcaccacttcatgttgttctctgatgagcgcattactcttgaagctgatgaaatt
gcgcaaacagagacctatgatgaagaatcacttcacatgagacaactattgaagaccaaa
ttggttgatatggatctttctgtaagagcattgaattgtttgaaagcagctgaagttgat
acattgggagatttggtttcttttaataagaatgatttgatgaaattcagaaacttcggt
aaaaagtccttaacagagttggaagaacttgtaattgttaagggattaagtttcggaatg
gacttgagcaaatacaaattagataaagactaa
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