Marinibacterium anthonyi: LA6_003198
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Entry
LA6_003198 CDS
T10601
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
manh Marinibacterium anthonyi
Pathway
manh02020
Two-component system
manh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
manh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LA6_003198 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LA6_003198 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manh03021
]
LA6_003198 (rpoN2)
Transcription machinery [BR:
manh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA6_003198 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_38
Sigma54_AID
HTH_IclR
MarR_2
HTH_Crp_2
HTH_3
HTH_23
HU-CCDC81_euk_2
LacI
HTH_AraC
HTH_31
HTH_28
HTH_21
CATSPERZ_C
Motif
Other DBs
NCBI-ProteinID:
QEW20997
LinkDB
All DBs
Position
complement(3329053..3330291)
Genome browser
AA seq
412 aa
AA seq
DB search
MTRGLRLQPRQAQVFRLGQVVGILQMTEAELDAHLGEAARDNPMLTLQWRPLAGAGDMIE
MLAVAEVNSLHAHVMQELAGLRAQGGLIERLIMALIEELEPSGRLGRSVAEIAMALDVAE
ELVGTALTLVQKRVEPAGLFARTLGECLRLQVEDREEMTPEMDLVLSHLPVLERGGVGGL
AQATGLCEAAVAGCLAAIRRLDPKPGARFAADPTLMRDPDVILRPDGTGWEIDLGTRLRA
EAGIARLPGGARSPETREALARARALKQALEIRRSALEQVVRVLVSRQDGFFRDGVQALE
PLSMAEIAQETGFHPSTVSRVMNGLLIEGPNGVVAARSLISGTAGAGSAHARPRVMARIR
ALLALEDPGAPLSDRKLVALLEAEGIRVSRRVVSKYRHEIGAATATRRKLSG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgactcggggtcttcggttgcagccccggcaggcccaggtctttcggctggggcaggtg
gtgggcattctgcagatgacggaggcagagcttgacgcgcatctgggcgaggcggcgcgc
gacaacccgatgctgacgctgcaatggcggcccttggccggggcaggcgacatgatcgag
atgctggcggtggccgaggtcaacagcctgcatgcccatgtcatgcaggaactggccggt
ttgcgggcgcagggcgggctgatcgaacggctgatcatggcgctgatagaggagctggag
ccatcgggccggctgggccggtcggtggccgagatcgcgatggcgctggacgtggccgag
gagctggtcgggacggccctgaccctggtgcagaagcgggtggaaccggcggggcttttc
gcacggacccttggggaatgcctgcggctgcaggtcgaggaccgcgaggagatgacgccc
gagatggacctggtgctgtcgcatctgccggtgctggaacgcggcggtgtcggcgggctg
gcgcaggcgacggggctgtgcgaggcggccgtggcggggtgccttgcggcgatccggcgg
cttgatccgaagccgggtgcgcggtttgcagcggatccgaccctgatgcgtgacccggac
gtgatcctgcgaccggacgggacgggatgggagatcgaccttggcacgcggctgcgagcc
gaagccgggatcgcgcgcctgcccggaggtgccagaagccccgagacgcgcgaggcgctg
gcccgggcgcgggcgttgaaacaggcgctggagatccgtcggtcggcgctggaacaggtg
gtgcgggtgctggtgtcgcgccaggacgggttctttcgcgacggggtgcaggcgctggaa
ccgctgagcatggccgagatcgcgcaggaaaccgggtttcatcccagcaccgtcagccgg
gtgatgaacggcttgctgatcgaagggcccaacggggtcgttgccgcacgcagcctgata
tcggggacggcaggggccgggtcggcccatgcccggccaagggtgatggcccgtatccgc
gcgctgctggcgctggaggatccgggggcgccgctgtccgaccggaagctggtggcgctg
ctggaggcggaaggcatccgggtgtcgcggcgggtggtgtcgaagtaccgccacgagatc
ggcgcggccacggcgacacggcgcaagctgtcgggctga
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